Gene Daro_3509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3509 
Symbol 
ID3567777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3760019 
End bp3760720 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content54% 
IMG OID637681981 
Productputative thiol:disulphide interchange protein (periplasmic) 
Protein accessionYP_286708 
Protein GI71909121 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1651] Protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.074793 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAAGA AGTTGTTGCC CTTGCTGTTG GCCGTTGCTT TCGGGGCGCA AGCCATGGCC 
GACGAAGCTG ATATCAAGAA AGCGATGGAG TCCAAACTGG GCACCAAGGT GGAGAGTGTC
ACCAAGTCTG GTTATCTCGG CCTTTATGAA GTTTTTGCTG ATGGCAATAT CGTCTACACG
GATGAGAAGG GAACGGCAAT CCTTGTCGGT CCGCTGATCG ATGGCAAGAC GATGAAAAAC
GTGACTGAAG AGCGCATGAA GAAGCTGACT GCGATCAAGT TCGGCGAATT GCCTCTTGAG
CGCGCCATCA AGCAGGTGCG GGGTGATGGC AAGCGGGTAA TGGCAACCTT CGAGGATCCT
AATTGCGGCT ATTGCAAGCG GTTGGCCAAG GAGTTGCAGA AGCTCGATAA CGTCACGATC
TACACCTTCT TGCTGCCGAT TCTTTCTGAG GATTCGGTGC GTAAGTCCCG GCAGATCTGG
TGTTCGCCTG ATCGCGCCAA GACATGGAAC GACTGGATGA TCGACGGCAA GGCGCCGGCC
GGTCGCGAGG ATTGCGATAC TTCCGCATTG TCCAAGAATC AGGAATTCGG GCGAAAACTG
AATATTACCG GTACGCCAAC CATGTTCTTC GGCGATGGTG AGCGCGTGCC CGGTGCCATG
CCGCTGGCGC GTATTGAGCA GAAGCTTGGT CAGGTCAGAT AA
 
Protein sequence
MLKKLLPLLL AVAFGAQAMA DEADIKKAME SKLGTKVESV TKSGYLGLYE VFADGNIVYT 
DEKGTAILVG PLIDGKTMKN VTEERMKKLT AIKFGELPLE RAIKQVRGDG KRVMATFEDP
NCGYCKRLAK ELQKLDNVTI YTFLLPILSE DSVRKSRQIW CSPDRAKTWN DWMIDGKAPA
GREDCDTSAL SKNQEFGRKL NITGTPTMFF GDGERVPGAM PLARIEQKLG QVR