Gene Daro_3501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3501 
SymbolmraY 
ID3567769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3750316 
End bp3751419 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content62% 
IMG OID637681973 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionYP_286700 
Protein GI71909113 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value0.727985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.121425 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTGG CTCTTGCCCA ATGGCTCGCC CAGGACGTTC GCTTTTTCAA CGTCTTCAAC 
TACATCACGC TGCGTGCCGT ACTCGCTGCG ATGACCGCGC TGTTGCTGTC GCTGGCTGCC
GGGCCGGCCG TCATCCGCTG GCTGGCGGCC AAGAAAATCG GCCAGGCGGT GCGCAATGAT
GGCCCGCAAA CCCATTTGGT CAAGTCCGGA ACCCCGACCA TGGGGGGCGT CCTGATCCTG
ATCGCCATCG GCATCACGAC CCTGCTGTGG GGGGATCTGA CCAACAAGTA TGTGTGGACC
GTGCTGGTCG TTACGCTCGG CTACGGCATC GTCGGCTGGT ACGACGACTG GAAGAAGGTC
GTCTATCGCG ATCCGAACGG GCTGGCCAGC CGCTGGAAAT TCTTCTGGCA GTCGGTGCTC
GGTATCGGCG CCGCGCTGTT CATCGCCTTC TCGGCCAAGA GTCCGGCGCA GACCGAGTTG
ATCATCCCCT TCTTCAAGAC GATGGCCTAT CCGCTGGGCG TCATCGGCTT CATCACGCTG
ACCTATTTCG TCATCGTCGG CACCAGCAAC GCGGTGAACC TGACCGACGG TCTGGATGGT
CTGGCCATCA TGCCGACGGT GATGATTGCC GCCGCCTTCG CGCTGATCGC CTATGTGACC
GGCCACGCGG TCTACGCCAA GTACCTGTTG ATCCCCTACG TTCCGGGCGC CGGCGAACTG
TGCATTTTCC TTGGCGCCAT CGCCGGGGCG GGGCTCGGCT TCCTGTGGTT CAACGCCTAT
CCGGCTGAAG TGTTCATGGG TGACGTCGGC GCGCTCGCCT TGGGCGCGGC GCTCGGCACT
GTTGCCGTGA TTGTTCGTCA GGAAATCGTG CTGCTGATCA TGGGCGGCGT CTTCGTGATC
GAAACCCTGT CGGTGATGCT GCAGGTCGGC TACTTCAAAT ACACCAAGCG GAAGTACGGC
GAGGGCCGGC GCATCCTGCG CATGGCGCCG CTGCACCATC ACTTCGAACA AACCGGCTGG
AAGGAGACGC AGGTCGTCGT CCGTTTCTGG ATCATCACCA TCATGCTCGT GCTGATCGGG
CTCTCTACCT TGAAGCTGCG CTAA
 
Protein sequence
MLLALAQWLA QDVRFFNVFN YITLRAVLAA MTALLLSLAA GPAVIRWLAA KKIGQAVRND 
GPQTHLVKSG TPTMGGVLIL IAIGITTLLW GDLTNKYVWT VLVVTLGYGI VGWYDDWKKV
VYRDPNGLAS RWKFFWQSVL GIGAALFIAF SAKSPAQTEL IIPFFKTMAY PLGVIGFITL
TYFVIVGTSN AVNLTDGLDG LAIMPTVMIA AAFALIAYVT GHAVYAKYLL IPYVPGAGEL
CIFLGAIAGA GLGFLWFNAY PAEVFMGDVG ALALGAALGT VAVIVRQEIV LLIMGGVFVI
ETLSVMLQVG YFKYTKRKYG EGRRILRMAP LHHHFEQTGW KETQVVVRFW IITIMLVLIG
LSTLKLR