| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3488 |
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| Symbol | |
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| ID | 3566948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 3735877 |
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| End bp | 3738591 |
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| Gene Length | 2715 bp |
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| Protein Length | 904 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637681960 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_286687 |
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| Protein GI | 71909100 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.185524 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATCCG GCCTACTCAA AAAGATTTTC GGCAGCCGCA ATGACCGGCT GATCAAGCAA
TACTCCCAGA ACGTCAAGCG TATCAACGCG CTGGAACCTG CCATGCAGGC CCTGAGCGAT
GAACAGTTGC GGGCCAAGAC AGACGAGTTC CGCCAGCGTC ACGCCAACGG TGAGTCGCTG
GACGATCTGT TGCCGGAGGC TTTCGCGGTG GTTCGCGAAG CCGGTCAGCG GGCGCTCGGC
ATGCGCCACT TCGACGTCCA GATGATTGGC GGCATGGTGC TGCATGACGG CAAGATTGCC
GAAATGCGGA CCGGCGAGGG CAAGACGCTG GTCGGCACCT TGCCGGCCTA CCTCAATGCC
ATTTCCGGCA AGGGCGTTCA TGTCATCACG GTCAACGACT ATCTGGCGAC CCGCGACTCG
GACTGGATGG GGCGTCTGCA CCGCTTCCTC GGCCTGACCG TCGGCGTGAA CCTGTCGCAG
ATGGACCACG AGGCCAAGCA GGCGGCCTAC GCGGCTGACA TCACCTACGG TACCAACAAC
GAATTCGGCT TCGACTACTT GCGCGACAAT ATGGTCTATA CGGCCGGTGA GCGCGTCCAG
CGTAGCCTGA ATTTCGCCAT CGTCGACGAA GTGGACTCGA TCCTGATCGA CGAGGCGCGC
ACCCCGCTGA TTATTTCCGG CCAGGCCGAA GATCACACCG ATCTCTACCT GCGGATGAAG
GACGTCGTGC CCAATCTGAC GCGGGCGATG GAAGAGAAAG ACGAAGGCGA CTACTGGGTC
GACGAGAAGG GCCATCAGGT CCATCTCTCC GAAACTGGCT ACGAGCACGC CGAGCAACTG
CTGGCCGAGT ATGGCCTGCT CAAGGAAGGC ACCAGCCTTT ACGACGCCGC CAACATCACG
CTGATGCACC ACCTGAATGC CGCCCTGCGC GGCATGACGC TGTTCCACAA GGATCAGCAT
TACGTCGTGC AGAACGGTGA AGTCGTCATC GTCGACGAAT TCACCGGTCG TCTGATGGCC
GGTCGTCGCT GGTCCGACGG CCTGCATCAG GCGGTCGAAG CCAAGGAAGG CGTGCAGATT
CAGGCCGAGA ACCAGACGCT GGCCTCGATC ACTTTCCAGA ACTACTTCCG GATGTACAAC
AAGCTGGCCG GCATGACCGG CACGGCCGAC ACTGAAGCCT ACGAATTCCA CCAGATCTAC
GGTCTGGAAA CGGTCGTCAT CCCGACCCAT CGGCCGATGG TTCGCAAGGA CATGAACGAT
CTGGTCTACA AGACGGCCGA CGAGAAGCAC GCGGCGATCA TTGCCGACAT CAAGGATTGC
GCCAAACGCG GCCAGCCGGT GCTGGTTGGC ACGACCTCGA TCGAAGCTTC GGAGTTGCTT
TCCGGCTTGC TCGACAAGGA AAGCCTGCCG CATCAGGTAT TGAATGCCAA GCAGCATGCC
CGTGAAGCAG AAATCGTCGT CCAGGCCGGT CGGCCGGGGA TGGTGACCAT CGCCACCAAC
ATGGCCGGTC GCGGTACCGA CATCGTGCTC GGCGGCAACA TCGAAAAACA ACTGGCTGCC
ATTCGCGATG ACGAGTCGCT GCCGGTGGAG GAACGCGAGC AGAAGGCTGC GGCGATGAAG
GCCGAGTGGC AGGAAGTGCA CAATGCCGTG CTGGCTTCCG GCGGCCTGCA CATCATCGGT
TCCGAGCGTC ACGAATCGCG CCGTATCGAC AACCAGTTGC GTGGTCGCGC CGGTCGTCAG
GGCGATGCCG GTTCCTCGCG TTTCTACCTG TCGCTCGATG ATCCCTTGTT GCGCATCTTC
GCCGGCGAAC GTCTGCGCGC CATCATGGAC AAGCTGAAAA TGCCGGAAGG CGAAGCGATC
GAGCATCCGC TCGTCACCCG CTCGCTGGAG TCGGCACAGC GCAAGGTCGA AGCCCGCAAT
TTCGATATCC GCAAGCAGCT GCTTGAATAC GACGACGTCT CCAACGACCA GCGCAAGGTG
ATCTACCAGC AGCGTAACGA ACTGCTGGAA ACGGATGATA TTTCCGAGAC CATCACTGCC
ATGCGCCAGA GCGTCATCGC CGAAACCTTC CGCACTTACG TGCCGGCAGA GTCGGTCGAG
GAGCAATGGG ACATGGAAGG GCTAGAGCGC GCCCTGGCAT CCGACCTGCA GATCATTGCA
CCGGTCGCCC AGTGGTTCAA GGATGAGCCG ACCCTGTCTG ACGAGGAAAT CCTCGAGCGC
ATCACCAAGA ATGCGGACGA AGCCTATCAG GCCAAGATCG ATCTGGTTGG TGACGGTACC
TTCCACCAGT TCGAGCGCAA TGTGATGCTG CAAAGCCTCG ATTCGCACTG GCGTGAGCAT
CTGGCGGCGC TGGATCACCT GCGTCAGGGT ATCCACCTGC GTGGTTATGC CCAGAAAAAT
CCGAAGCAGG AATACAAGCG CGAAGCTTTC GAACTGTTCG AAGGCTTGCT GGATCTGGTT
CGCCGCGAAG TGACCCGCGT CGTATTCACC GTGCAGATTC GTACGCCGGA AGATGTCGAG
GAAACTGCAC CGCACGCCGA AGTGCAGAAC GTCCAGTATC AGCACGCCGG TTACGATGAG
GCGCTGGGTG AGGGCGAAGG CGCCGAGGCT GCTGGCCAGC AGCCGGCGGA TGCCGGGCCG
AAGATCGGAC GCAACGATCC CTGCCCTTGC GGATCGGGCA AAAAATACAA ACACTGCCAC
GGAAAACTTT CCTGA
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| Protein sequence | MISGLLKKIF GSRNDRLIKQ YSQNVKRINA LEPAMQALSD EQLRAKTDEF RQRHANGESL
DDLLPEAFAV VREAGQRALG MRHFDVQMIG GMVLHDGKIA EMRTGEGKTL VGTLPAYLNA
ISGKGVHVIT VNDYLATRDS DWMGRLHRFL GLTVGVNLSQ MDHEAKQAAY AADITYGTNN
EFGFDYLRDN MVYTAGERVQ RSLNFAIVDE VDSILIDEAR TPLIISGQAE DHTDLYLRMK
DVVPNLTRAM EEKDEGDYWV DEKGHQVHLS ETGYEHAEQL LAEYGLLKEG TSLYDAANIT
LMHHLNAALR GMTLFHKDQH YVVQNGEVVI VDEFTGRLMA GRRWSDGLHQ AVEAKEGVQI
QAENQTLASI TFQNYFRMYN KLAGMTGTAD TEAYEFHQIY GLETVVIPTH RPMVRKDMND
LVYKTADEKH AAIIADIKDC AKRGQPVLVG TTSIEASELL SGLLDKESLP HQVLNAKQHA
REAEIVVQAG RPGMVTIATN MAGRGTDIVL GGNIEKQLAA IRDDESLPVE EREQKAAAMK
AEWQEVHNAV LASGGLHIIG SERHESRRID NQLRGRAGRQ GDAGSSRFYL SLDDPLLRIF
AGERLRAIMD KLKMPEGEAI EHPLVTRSLE SAQRKVEARN FDIRKQLLEY DDVSNDQRKV
IYQQRNELLE TDDISETITA MRQSVIAETF RTYVPAESVE EQWDMEGLER ALASDLQIIA
PVAQWFKDEP TLSDEEILER ITKNADEAYQ AKIDLVGDGT FHQFERNVML QSLDSHWREH
LAALDHLRQG IHLRGYAQKN PKQEYKREAF ELFEGLLDLV RREVTRVVFT VQIRTPEDVE
ETAPHAEVQN VQYQHAGYDE ALGEGEGAEA AGQQPADAGP KIGRNDPCPC GSGKKYKHCH
GKLS
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