| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3483 |
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| Symbol | |
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| ID | 3566943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 3731785 |
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| End bp | 3732486 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637681955 |
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| Product | ribulose-5-phosphate 3-epimerase |
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| Protein accession | YP_286682 |
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| Protein GI | 71909095 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 0.237875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.176522 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAGCCA AAGATTACGT TATCGCACCG AGCATTCTTT CAGCCAATTT CGCCAAGCTG
GGCGAAGAAG TGGCCAACGT CATCGCCTCG GGGGCTGACT GGATTCACTT TGACGTGATG
GATAACCATT ATGTTCCCAA CCTGACCATC GGGCCGCTGG TTTGCGAGGC AATCCGCCCG
TGCACCACGG CGCCGATCGA CGTGCACCTG ATGGTCAAGC CGGTCGATCG CATCATCCCC
GATTTTGCCA AAGCCGGGGC GAATATCATC ACTTTTCACC CGGAAGCTTC CGAACACGTT
GACCGTAGCC TGTCGCTGAT CCGCGATGCC GGTTGCAAAG GCGGCTTGGT CTTCAACCCG
GCGACCCCGC TTGATTACAT GGATTACGTC CTCGACAAGA TCGACGTCAT CCTGTTGATG
AGCGTCAACC CCGGCTTCGG CGGCCAGAAA TTCATTCCGG GCACGCTGGC CAAGGCGAAA
CAGGCCCGGG CCAAGCTCGA TGCTTACGAG CGCGAAACCG GCCGCCGTAT CCGTCTGGAA
ATTGATGGCG GCGTGAACAC GGCCAACATT GCCGAAATCG CCCGTGCAGG CGTTGATGCC
TTCGTCGCCG GTTCGGCTGT CTACGGCGCC GGCAAGGACA GCGATCCGCA TCGTTACGAT
TCGATCATTG GCGCCCTGCG CAGCGAACTG GCCAAAGTCT GA
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| Protein sequence | MSAKDYVIAP SILSANFAKL GEEVANVIAS GADWIHFDVM DNHYVPNLTI GPLVCEAIRP
CTTAPIDVHL MVKPVDRIIP DFAKAGANII TFHPEASEHV DRSLSLIRDA GCKGGLVFNP
ATPLDYMDYV LDKIDVILLM SVNPGFGGQK FIPGTLAKAK QARAKLDAYE RETGRRIRLE
IDGGVNTANI AEIARAGVDA FVAGSAVYGA GKDSDPHRYD SIIGALRSEL AKV
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