Gene Daro_3475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3475 
Symbol 
ID3567343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3723591 
End bp3724379 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content60% 
IMG OID637681947 
Productindole-3-glycerol phosphate synthase 
Protein accessionYP_286674 
Protein GI71909087 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0134] Indole-3-glycerol phosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value0.00758651 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.194157 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA TCCTCAACAA GATCATCGCC ACCAAGCGCG AAGAAGTTGC TGCGGCAAGG 
CTCGCCAAAC CCTTGGCTAT CGTTGAGGCC GAAGCGATAG CCCAGCCAGC GCCCAGGGAT
TTTGTCGGCG CCATTCGCAA CAAGATCGCC AATGATCGGC CGGCCGTGAT TGCTGAAATC
AAGAAAGCCA GCCCATCGAA GGGCATCATC CGCCCCGATT TTCAGCCCGC GGATATCGCC
CGCAGCTACG AGCAGCATGG TGCGGCCTGT CTGTCGGTGC TGACGGATCG CCAGTATTTC
CAGGGTTGCC CTGAATATCT CCAGTCTGCC CGTGCCGCCT GTGCGCTGCC GGTGCTGCGC
AAGGACTTCA TGGTTGATGC CTATCAGGTG GCCGAAGCGC GAGCCATGGG GGCTGACGCC
ATCCTGTTGA TCGCTGCGGC ACTGACGCTG GAAGAAATGC AGGCCCTTGA AACACAGGCC
AGCGCTTACG GCATGGCCGT GCTGGTCGAA GTGCACAACG GCGAAGAGCT CGATGCCGCC
TTGCAACTCA AAACTCCGCT GCTCGGCATC AACAACCGTA ACCTGCGCAC CTTTGCCGTG
ACGCTTGAAA CAACGCTCGG TTTGCTGTCC AGGATTCCGG CTGGCCGCAT CGTGGTCACT
GAAAGCGGCA TCCTGAAGCC GGAAGAAGTC GCCCTGATGC GCACCAACAA GGTCAATGCC
TTCCTGGTCG GCGAAGCCTT CATGCGCGTG CCCGAGCCAG GTGCCGAGTT GGCCCGATTG
TTCGCCTGA
 
Protein sequence
MSDILNKIIA TKREEVAAAR LAKPLAIVEA EAIAQPAPRD FVGAIRNKIA NDRPAVIAEI 
KKASPSKGII RPDFQPADIA RSYEQHGAAC LSVLTDRQYF QGCPEYLQSA RAACALPVLR
KDFMVDAYQV AEARAMGADA ILLIAAALTL EEMQALETQA SAYGMAVLVE VHNGEELDAA
LQLKTPLLGI NNRNLRTFAV TLETTLGLLS RIPAGRIVVT ESGILKPEEV ALMRTNKVNA
FLVGEAFMRV PEPGAELARL FA