Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_3466 |
Symbol | |
ID | 3567334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 3715813 |
End bp | 3717012 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637681938 |
Product | hypothetical protein |
Protein accession | YP_286665 |
Protein GI | 71909078 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 58 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCTGGT CCGATGCCTT CCAGCTTGCC CTGCGCGCCA TTACCGCCCA GCGCCTGCGC AGCTTCCTTA CCCTGCTCGG CATTGCCGTC GGCATTGCGG CGGTGATCCT GCTCACCTCG ATCGGCGAAG GCATTCACCG CTTCGTGCTC GGCGAATTCA CCCAGTTCGG GACCAATGTC ATTACCGTCG CTCCGGGCAA GACCAAGACT GGCGGCTCCC CCTCCGGCCT GCCGTCGAGT GCCCGCCCGC TGTCACTGGA CGACGCCAAA TCGATCGAAC GCCTGCCCCA TGTCGTTGCC GTCACGCCCA ATGTCCGCGG CAATGCCGAA GTTGAAGGCA ATGGCCGGAC ACGGCGCACA CTGATCTACG GCGTCAATTC AAAACTCCCC CTGATTTTCC GGTCGACAGT GCAGAGCGGC CAGTTTTTGC CCGCTGACGA TGAAGGCAGC GCCCGTCCCT TCGTCGTCCT CGGTTCCAAA CTAAAGAATG AATTGTTCGG CAGCGAAAAT CCGCTTGGCC AGCGCCTGCG CATCAGCGGT CTGCACTTCC GGGTCATTGG CGTACTGGCC CCCAAAGGCC AGTTCCTCGG CATTGACCTC GACGACACCG CTTTCGTGCC CACCGCCCGC GCCCAGGAGT TGTTCAACCG CGAAGGAGTC GATGAAATCA ACATTGCCGC CGAAGAGGGC ATTCCCTCCG CCATCGTCGC CAACCGCGTC AAGACTCACC TGATCGACCG CCACAACCGC GAGGATTTCA CCATCGTCAC GCAGGAAGAG ATGCTGAAAA CCCTGTCCAA TATCCTCAAC GTGCTGACCA TGGCCGTCGG CGCGCTCGGC GGTATTTCGC TACTGGTCGG CGGCGTCGGC ATCGTCACCA TCATGACCAT CGCCGTGACC GAGCGCACCG GTGAAATCGG CCTGCTGGTC GCCCTCGGTG CCCCCCGACG CACCATCCTC GCCCTTTTCC TTGGGGAAGC CGTCGCCCTG TCGGCGCTTG GTGGCATTTT TGGTCTGGCG CTTGGTTTCG GCCTGGCCCA GCTCATCCAT TTTGCGCTCC CCGCGCTGCC GGTCCACACC CCGCTCAGCT TCGTCCTGCT CGCCGAAGGC ATCGCCATCA CCATCGGCCT CGCCGCTGGC GTGCTACCCG CCCGCAACGC TGCCCGTCTC AATCCCGTCG AGGCCTTGCG CACCGAGTAA
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Protein sequence | MLWSDAFQLA LRAITAQRLR SFLTLLGIAV GIAAVILLTS IGEGIHRFVL GEFTQFGTNV ITVAPGKTKT GGSPSGLPSS ARPLSLDDAK SIERLPHVVA VTPNVRGNAE VEGNGRTRRT LIYGVNSKLP LIFRSTVQSG QFLPADDEGS ARPFVVLGSK LKNELFGSEN PLGQRLRISG LHFRVIGVLA PKGQFLGIDL DDTAFVPTAR AQELFNREGV DEINIAAEEG IPSAIVANRV KTHLIDRHNR EDFTIVTQEE MLKTLSNILN VLTMAVGALG GISLLVGGVG IVTIMTIAVT ERTGEIGLLV ALGAPRRTIL ALFLGEAVAL SALGGIFGLA LGFGLAQLIH FALPALPVHT PLSFVLLAEG IAITIGLAAG VLPARNAARL NPVEALRTE
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