| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3417 |
|---|
| Symbol | |
|---|
| ID | 3568679 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 3669180 |
|---|
| End bp | 3671138 |
|---|
| Gene Length | 1959 bp |
|---|
| Protein Length | 652 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637681889 |
|---|
| Product | potassium efflux system protein |
|---|
| Protein accession | YP_286616 |
|---|
| Protein GI | 71909029 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0475] Kef-type K+ transport systems, membrane components
[COG0569] K+ transport systems, NAD-binding component |
|---|
| TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.00166015 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.19535 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGCGCAC TTTCCCTCGT CCTTCTGCTG CTTGGCGCCT CGGTCCTGGC CGTGGTCATC
TGCCGGCGCA TCAACCTGCC GCCGGTGCTC GGTTACCTGT TCGTTGGCAG CGTCATCGGG
CCACATGCGC TGAACCTGAT GCACGACATG CACCAGGCCG AATATCTGGC CGAATTCGGC
GTCGTTTTCC TGATGTTCTC GATTGGCCTC GAGTTCTCGC TGCCCAAGCT GTATGCGATG
AAGCGCATCG TGTTCGGGCT TGGCCTGCTG CAGGTGGTTC TCAGTATGGC GCTGGTTGCC
GGCCTAGTCA TGCTGTTCGG GGTTAGTTGG CAACTGGGTA TCGCGCTGGG CGGGGTGTTT
GCCATGTCGT CGACGGCGGT GCTGACCAAG TTGCTGGCCG AGCGCATGCA GCTCGATTCG
CCGCATGGTC GGGAAATCAT GGGCGTGCTG CTGTTCCAGG ATCTGGCCGT TGTGCCTTTG
CTGGTGATCA TTCCCTCGCT GACCGAACCG CCGGAAAAAC TGGCCATGCT GCTCGGTGTG
GCCTTGATCA AGGCGATTGT CGTGCTGGCG GTGATTCTCG TCTTTGGCCA GCGCCTGATG
CGCAAGTGGT TCCATTTTGT CGCCCGCGCC AAGTCATCCG AAGTGTTCGT GCTCAATGTG
CTGCTGATTA CCCTCAGCCT CGCCACCATC ACCGAACTGG CCGGGCTTTC CTTGGCGCTG
GGCGCTTTCG TGGCCGGCAT GCTGATCTCG GAAACCGAAT ACAAGTTTCA GGTGGAAGAA
GACATCAAGC CCTTCCGCGA TGTGCTGATG GGGCTGTTCT TCGTCACTAT TGGCGTCAAG
CTGGACCTGC ATATCCTGCT CGGGTTGTGG TGGCAGGTGT TGCTGGCCTT GGTTGCGCTG
CTGGTGATCA AGTCGCTGGT TGTCGGCGTG CTGTCGTGGC GGCTGGGCGC TTCGCCAGGA
AACGCCATCC GTTCGGCCTT GTGGTTGTGC GCCGGTGGCG AATTCGGCTT TGTGCTGCTC
GGCGAAATTT TGCATCTGCC CCGGGAAATC CAGCAGATCG CGTTGACTGT GCTGGTCTTG
TCGATGCTGA TTGCGCCTTT CATCGTTCAG TACAGCGAAC GGGTCGTCAT GCGTTTCGTG
GCCAGCGAAT GGTTGATGCG TTCGATGCAA TTGACCAAGA TCGCAGCCCA GTCAATGGGC
TCGGAAAAGC ATGCCATTCT TTGCGGTTTC GGGCGAAATG GCCAGTATCT CGCCCGTTTT
CTGGCGCAGG AAGATATTAA TTACGTGGCT CTCGACCAGG ACCCGGATCG CGTTCGGGAG
GCCGCTGCCG GTGGTGAAAA TGTGGTTTAC GGTGATGCCG GACGGAAAGA GGCGTTGATG
GCCGCCGGGC TGATGCGGGC CAGCGTCGTT ATTGTGACTG TCAGCGATAC GCCCCTGTCT
GAAAAGATCT TGCATCATGT TCAGGAGTTG CGTCCCGATG TGCCGGTGAT CGTGCGTACT
GCCGATGAAC GCGATATGGA GCGCCTGACC CGGGCCGGAG CGGCCGAAGT CGTGCCGGAG
GCGCTGGAGG CCAGCCTGAT GCTGGCTTCC CACGCATTGG TACTGGTCGG TATCCCGATT
AACCGGGTGC TCAAGCGCGT TCGCCAGACT CGCTCAAAAC GTTACAGCCT GTTGCGCGGC
TACTATCGAG GCATGTCGGA CCGCGATCAT GATGAAGAAG ACGAGTATCA GCCTCGTCTC
CACTCCGTGC TGCTCGTTTC CGGTTCGGCC GCAATTGGAC GGACGCTGGA TGCGCTGAAT
CTGGACGCAC TGGGTTGCGA GGTCAGTGCC ATTCGCCGGC GCGGCATCCG GGCGTTGGAG
CCGGCTCCGG AAACCCGGCT GGAGGAAGGC GATGTCGTGG TCTTGCTCGG CCTTCCCGAA
GTGGTCATGG CGGCCGAGGA AAGGCTGCTG CAGAATTGA
|
|---|
| Protein sequence | MSALSLVLLL LGASVLAVVI CRRINLPPVL GYLFVGSVIG PHALNLMHDM HQAEYLAEFG
VVFLMFSIGL EFSLPKLYAM KRIVFGLGLL QVVLSMALVA GLVMLFGVSW QLGIALGGVF
AMSSTAVLTK LLAERMQLDS PHGREIMGVL LFQDLAVVPL LVIIPSLTEP PEKLAMLLGV
ALIKAIVVLA VILVFGQRLM RKWFHFVARA KSSEVFVLNV LLITLSLATI TELAGLSLAL
GAFVAGMLIS ETEYKFQVEE DIKPFRDVLM GLFFVTIGVK LDLHILLGLW WQVLLALVAL
LVIKSLVVGV LSWRLGASPG NAIRSALWLC AGGEFGFVLL GEILHLPREI QQIALTVLVL
SMLIAPFIVQ YSERVVMRFV ASEWLMRSMQ LTKIAAQSMG SEKHAILCGF GRNGQYLARF
LAQEDINYVA LDQDPDRVRE AAAGGENVVY GDAGRKEALM AAGLMRASVV IVTVSDTPLS
EKILHHVQEL RPDVPVIVRT ADERDMERLT RAGAAEVVPE ALEASLMLAS HALVLVGIPI
NRVLKRVRQT RSKRYSLLRG YYRGMSDRDH DEEDEYQPRL HSVLLVSGSA AIGRTLDALN
LDALGCEVSA IRRRGIRALE PAPETRLEEG DVVVLLGLPE VVMAAEERLL QN
|
|---|
| |