| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3402 |
|---|
| Symbol | |
|---|
| ID | 3568664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 3651406 |
|---|
| End bp | 3652218 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637681874 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_286601 |
|---|
| Protein GI | 71909014 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 69 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCGGACG ACATCCTGGT CGATATCGAG AACCTCCACT TCAATTATGA CGGCAGGCCT
GTGCTGCAAG GAATCAACAT GAAGATTCCG CGTGGCAAGG TGGTGGCTAT CATGGGTGGT
TCCGGTTGCG GCAAAACCAC ACTGTTGCGT TGCATCGGCG GCCAGTTGCG GCCGACCGGC
GGTCGGGTTC GGCTGGAAAA ACACCAGGTG TGCGAGATGA GCGAGGCTGA GTTGTATCGC
CTGCGGCGCC GAATGGGGAT GCTTTTTCAG TTCGGCGCCT TGTTTACCGA CATGACCGTT
TTCGACAATG TCGCTTTTCC GATGCATGAG CACACGGATA TGTCGGAAGA AATGATCCGC
GATCTGGTGC TGATGAAGCT CGAGGCGGTT GGGCTGCGTG GTGCGCATAA GTTAATGCCG
GGTGAATTGT CTGGCGGGAT GGCGCGACGG GTTGCCCTGG CGCGTGCGCT GGCGCTTGAT
CCGATGTTGG TCATGTACGA CGAGCCGTTT ACCGGTCTTG ATCCGATTGC ACTCGGCGTG
ATTGGCCAGT TGATTCGCAA ATTGAACGAT GCGCTGGGCG CAACGTCCAT CATGGTGACC
CACGATATTC ACGAGTCCTT GTTGATCGTC GATTACATCT ATTTCCTGAA CGGCGGCCAG
GTCGTCGCCG AAGGAACGCC GGACGAGATT CGTGCTTCGA AGGATCCGTT CGTGCACCAA
TTCGTTTATG CCGAGCCAGA TGGCCCGGTG CATTTTGATT ATCCCGCCCC GTCAGTACGC
GACGAGTTCC TGAGCGGGGT CGGGCATGCT TGA
|
|---|
| Protein sequence | MSDDILVDIE NLHFNYDGRP VLQGINMKIP RGKVVAIMGG SGCGKTTLLR CIGGQLRPTG
GRVRLEKHQV CEMSEAELYR LRRRMGMLFQ FGALFTDMTV FDNVAFPMHE HTDMSEEMIR
DLVLMKLEAV GLRGAHKLMP GELSGGMARR VALARALALD PMLVMYDEPF TGLDPIALGV
IGQLIRKLND ALGATSIMVT HDIHESLLIV DYIYFLNGGQ VVAEGTPDEI RASKDPFVHQ
FVYAEPDGPV HFDYPAPSVR DEFLSGVGHA
|
|---|
| |