Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_3344 |
Symbol | |
ID | 3568299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 3600516 |
End bp | 3601517 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637681816 |
Product | secretion protein HlyD |
Protein accession | YP_286543 |
Protein GI | 71908956 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 58 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.144623 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTATAT TTATGAGCGC AAACATTCTT CGTCCTTTGG TTTTTGGCCT TCTTTTGGTA TCGACTGCGG TATTTTCCGT CGAGCCGTTG CCGGTCGTTG CCGTCCAGCG GCATGCGGTC GATCTGACTT TTCCTGCCGA ATCGCTGGTT GAAGCTGTCC AGCAGGCGAC GGTTGGCGCC CAGTTGGCGG GCCGGGTGCT GGAAGTGAAG GCCGATGCCG GGCAGTCCGT GAAGAAGGGC GATGTGCTGA TGCGTATCGA TGCCCGCGAA GCGGCTGAGG CAGCGCGGGC GGCTGAGGCG CAGTACGCCA ATGCCAAAGT CAGTTACGAA CGGACGAAAA GCTTGGTGGC GCAGAAATTC ATGAGCGGTG CCGCGCTCGA CAAGGCCAAG GCCGATTTTG ATGCAGCCGC CGCCAATCGC TCGGCGGCCG GGGCCAGTCA GAGTCATGCA ACCATCGTTG CGCCGATCAC CGGCATTGTC GCCCGTCGCC ATGCCGAACT GGGTGATATG GCCATGCCCG GTGTGCCTTT GTTCACCATT TATCAGCCGG GAAGCCTGCG GGTTACGGCC AGTATTCCGC AGCATCGCCT GAAGGAGATG CGCTCCGTGA AAACGGCGCG GGTCGAATTT CCGGAGCTGG GCAAATGGGT CGACTCAAAT AGCGTTCAGT TGCTGCCGAC CGCCGATGCT TCGACCCATG TTTCGCAGGT GCGCGTCAGC TTGCCGGATG TGGCGGATGC GATGCCTGGC ATGTTCGCCC GCGTTCATTT CGTGACCGGT CAGGCGGAAA AACTGACGGT GCCGGCTGTC GCCGTGCTCC GCCGTGGCGA AGTAGCGGCG GTCTATGTGC AAACCCCCGA CAACCGTCTG AGCCTGCGCC AGCTGCGTCT GGGCGATACC GTCGGGCAGG GCGAGATCGA GGTGCTGGCC GGCCTGGCCA GTGGCGACAA GGTGGTCACC GATCCGGTCA AGGCCGCCAT CCAGCTCAAG TCAGGTCAGT AG
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Protein sequence | MLIFMSANIL RPLVFGLLLV STAVFSVEPL PVVAVQRHAV DLTFPAESLV EAVQQATVGA QLAGRVLEVK ADAGQSVKKG DVLMRIDARE AAEAARAAEA QYANAKVSYE RTKSLVAQKF MSGAALDKAK ADFDAAAANR SAAGASQSHA TIVAPITGIV ARRHAELGDM AMPGVPLFTI YQPGSLRVTA SIPQHRLKEM RSVKTARVEF PELGKWVDSN SVQLLPTADA STHVSQVRVS LPDVADAMPG MFARVHFVTG QAEKLTVPAV AVLRRGEVAA VYVQTPDNRL SLRQLRLGDT VGQGEIEVLA GLASGDKVVT DPVKAAIQLK SGQ
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