| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3331 |
|---|
| Symbol | |
|---|
| ID | 3566315 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 3584342 |
|---|
| End bp | 3587041 |
|---|
| Gene Length | 2700 bp |
|---|
| Protein Length | 899 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637681803 |
|---|
| Product | bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase |
|---|
| Protein accession | YP_286530 |
|---|
| Protein GI | 71908943 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1391] Glutamine synthetase adenylyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00015432 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGACACCA CCCTCGATCC CCGCTGGAAA GCCGCTGTCG ACCACAGCCG CTATCTGGCC
AATCTGCTTA ATTCCCGCCC GGACCTGATC CCGGAGCTGG CCGCCACCTG GCAGCAGCCA
CTGTCCGAGG AACTCCTGCT GGCGCCGCTG CAGCGGGAAT TTGCCGACGA CGATGCTGTC
CGTTCCGTGC TGCGCCGCCT GCGCCATCGC GCCATGGCCC ATCTTATCCT GCGCGACCTG
GGCGGGCTGG CGCCGCTGGC CGAGATTGTC GAGAGCATGA CCCTGCTCGC CGACGTGACG
ACCAATTTCG CGCTCGACTA CTACCACCGC CAGCTGGTCG CCACCTATGG CGAGCCGCTC
GACAAGCAGG GCCGCCCGCA GCGCCTGCTG ATCATCGGCA TGGGCAAACT CGGCGGACGT
GAGCTGAATG TCTCATCCGA CGTCGATTAC ATCTTCATCT ACCCGGAAGA CGGCGATACG
GCTGGCCCGA AGAGCATCGA GAATTTCGAC TTCTTCACCC GCCTCGGCAA ACGCATCATC
GGCGCCCTTG GCGACCTGAC CGCGGATGGC CAGGTCTTCC GCGTCGACAT GCGCCTGCGA
CCGAACGGCG ATTCCGGCCC GCTGGTCTGC TCGCTCGATG CACTGGAGAA CTACTTCATC
ACCCAGGGCC GAGAATGGGA GCGCTACGCC TGGATCAAGG GGCGGACCAT GAATGCCGGC
GCCAATCTAC AACCCGAGTG GGTGACGGCG ATGCAGAAAA TTGGCCGGCC CTTCGTTTTC
CGCAAGTATC TCGACTTCGG CGCCATCAAC GCCATGCGCG ACCTGCACGC GCAAATCCGC
CGCGAAGTGG CACGCAAGGA CATGGCCGAC CACGTCAAGC TCGGCCCGGG CGGCATTCGC
GAAATTGAAT TCATGGCCCA GGTTTTCCAG CTGATTCGCG GTGGCCGCGA CATGGCGCTG
CAGATCCGGC CGACGCTGTC GGTGCTGGCG CTGCTGGTCG ACCGCAAGCT GATCCCGGCC
GAGACCGAGC AGGAGTTGCG TGAAGCCTAC GTCTTCCTGC GCCGCCTTGA ACACCGACTG
CAGTATGTCG AAGACAAGCA GACGCACATG CTGCCACTCG AAGACAGCGA AAAGGCCAAG
ATCGCCCGCA GCATGGACTT CCCGGACTGG GCCTCGATGC TCGCGGTACT CGACGACCAT
CGCAACAAGG TCAGCCGCCA CTTCGAAGCC GTCTTCTCCG ATCCCGAGGC CGGCGAACAT
CCGCTAATCG GCCTGTGGCA GGGGCAGATG GACGAAGAAA CCGCCATCGA AGCCTTCGGC
AACCTTGGCT TTCGGCACCC GCGCGAGGCC ATCACCCGCC TGGCCGAACT GCGTGCCTCC
AGCCGCTACC AGCAGCTGCC GGCCACCAAC CGCTCCCGCC TCGACGCGGT CGGTCCACGC
CTGATCGAAG CCGCTGGCGC CACCGGCGCA CCCGACACGA CATTGGCCCG CGGCATCACC
TTCCTCGAAG CGATTGCCCG CCGCGGCTCG TATCTGGCCC TGTTACAGCA GTACCCGATG
GCGTTGCGGC GCGTCGCCGA CATGATCTGC GCTTCCAACT GGGCGGCCGA ATACCTGAAC
CGCCACCCGC TGCTCCTCGA CGAACTGCTC GACCCGCGCC TCTACGAAAT CGCCACCGAC
TGGACTGGCT TCCGTGAAAA TCTGCGTGCC AACCTGGCCC AGCATGCCGG CGATACCGAA
CGCGAAATGG ACATCCTGCG CGAAGTGCAC CACGGCCAGG TTTTCCGGCT GCTGGCCCAG
GATCTGGCCG GCCTGCAGAC CATCGAGCAC CTGTCCGACC ATCTGACCGA ACTGGCCGAT
ACCATCGTCC AGGAAACCCT GCCGCTGTGC TGGAAAACGA TCAAGAAACG GCATTGCGAA
ACGCCGAAGT TTGCGATCAT CGGCTACGGC AAGATGGGTG GCAAGGAGCT GGGCTACGCC
TCTGACTTAG ACCTCGTCTA TCTCTATGAA GACGACGATC AGGATGCCCC GGAAAACTAC
ACCCGCCTCG GCCAACGCCT GAATTCCTGG CTATCGAGCC AGACCTCGGC CGGCATCCTG
TTCGAGACTG ACCTTCGACT GCGCCCGAAC GGCGACTCCG GCCTGCTCGC TGTCTCGGTG
GACGCTTTCC GCGACTACGA GCTGAACAAC GCCTGGGTCT GGGAGCACCA GGCCCTGACC
CGCGCCCGCT TCTGCGCCGG CGACCCGGCG GTCGGCCAGC GTTTCGAGGA AATCCGCTGC
GAAATCCTGC GCCAGCCGCG CGACCTCGCC AAACTGAAGG AAGAGGTCGT CGCCATGCGC
CGCAAGATGC TCGACGCGCA TGCCTCGAAG AGCGAAACCG AATTCGGGCT CAAGCACGAC
ATCGGCGGGA TCGTCGATGT CGAGTTCATC GTCCAGTATC TGATCCTTGG CTATGCCCAC
CAGCACGCCA GCCTGACCGG CAATCTCGGC AACATCGCCC TGCTGCGCAT GGCCGGCGAA
CTGGGTCTGA TCGATCCGCT ACAAGCAGAA GCCGCCGGCA ACGCCTATCG CGAATACCGG
CGCCTGCAAC ACGCCAGACG CCTGTCAGCC AACCCCAAGG CCCTGGTGCC GCGCGAAGCG
GTGGAACCGC ACATTGCGGC TGTCGAAACG CTCTGGGAGA GCGTTTTCAG CACCCGCTAG
|
|---|
| Protein sequence | MDTTLDPRWK AAVDHSRYLA NLLNSRPDLI PELAATWQQP LSEELLLAPL QREFADDDAV
RSVLRRLRHR AMAHLILRDL GGLAPLAEIV ESMTLLADVT TNFALDYYHR QLVATYGEPL
DKQGRPQRLL IIGMGKLGGR ELNVSSDVDY IFIYPEDGDT AGPKSIENFD FFTRLGKRII
GALGDLTADG QVFRVDMRLR PNGDSGPLVC SLDALENYFI TQGREWERYA WIKGRTMNAG
ANLQPEWVTA MQKIGRPFVF RKYLDFGAIN AMRDLHAQIR REVARKDMAD HVKLGPGGIR
EIEFMAQVFQ LIRGGRDMAL QIRPTLSVLA LLVDRKLIPA ETEQELREAY VFLRRLEHRL
QYVEDKQTHM LPLEDSEKAK IARSMDFPDW ASMLAVLDDH RNKVSRHFEA VFSDPEAGEH
PLIGLWQGQM DEETAIEAFG NLGFRHPREA ITRLAELRAS SRYQQLPATN RSRLDAVGPR
LIEAAGATGA PDTTLARGIT FLEAIARRGS YLALLQQYPM ALRRVADMIC ASNWAAEYLN
RHPLLLDELL DPRLYEIATD WTGFRENLRA NLAQHAGDTE REMDILREVH HGQVFRLLAQ
DLAGLQTIEH LSDHLTELAD TIVQETLPLC WKTIKKRHCE TPKFAIIGYG KMGGKELGYA
SDLDLVYLYE DDDQDAPENY TRLGQRLNSW LSSQTSAGIL FETDLRLRPN GDSGLLAVSV
DAFRDYELNN AWVWEHQALT RARFCAGDPA VGQRFEEIRC EILRQPRDLA KLKEEVVAMR
RKMLDAHASK SETEFGLKHD IGGIVDVEFI VQYLILGYAH QHASLTGNLG NIALLRMAGE
LGLIDPLQAE AAGNAYREYR RLQHARRLSA NPKALVPREA VEPHIAAVET LWESVFSTR
|
|---|
| |