| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3305 |
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| Symbol | ugpQ |
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| ID | 3566485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 3554459 |
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| End bp | 3555202 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637681778 |
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| Product | cytoplasmic glycerophosphodiester phosphodiesterase |
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| Protein accession | YP_286505 |
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| Protein GI | 71908918 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 0.233023 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.109896 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCATC CGCTGCCGCG CTGGTTTGCC CATCGCGGTG GCGGCTCGCT GGCACCGGAG
AATACGCTGG CCGGTATCCG GCTGGCGGCG CGCTTGGGGT ACAAGGCCGT CGAATTTGAC
GTGATGCTTT CCGGGGACGG TACGCCTGTA CTGATTCACG ATGAAACGCT GGAGCGGACG
ACCAACGGCA GCGGGCGGGT TTGCGAGGCC ACTGATTCAC AGTTGTTTCG GCTTGATGCC
GGTAACGGCG AGCCCATTCC CCGGTTTTCC GAAGCGGTGG CGCTGTGTCG GGAATATGGC
CTGCTGGCCA ATGTCGAGAT CAAGCCGGCA ACCGGCTTTG AGCGCCAGAC GGCGGAGACG
GTTGCGCTCA TGACAAAGCA ACTCTGGCAG GGCGCTGCAA TTCAACCGCT GATTTCCTCG
TTTTCACTGG AAGCCATCGA GGTGGCACGT GATCTGGCAC CGAATATCCC CCGTGGCTTG
TTGTTCGAGT CGGTGCCGGA TGACTGGTTG CAGGCGATGT CTCGCTGGCA GGCGCTGACG
CTGCATTGTT CAGCCAGCCA TGTCAGTGAC CAGGTGCTGG CCGAAGCGTG CGAGTGTGGT
GTGCCGGTGC TTTGTTACAC GGTCAACCAG ACGGAGCAGG CAAAAGCGCT TTTCGAGCGT
GGGGTTAGTG CTGTATTCAC TGACCGTCTT GATTTGTTTT CATCAGAAAC AAGTGCTTAC
AAAGGCTTGC AATTAGGCGG CTGA
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| Protein sequence | MKHPLPRWFA HRGGGSLAPE NTLAGIRLAA RLGYKAVEFD VMLSGDGTPV LIHDETLERT
TNGSGRVCEA TDSQLFRLDA GNGEPIPRFS EAVALCREYG LLANVEIKPA TGFERQTAET
VALMTKQLWQ GAAIQPLISS FSLEAIEVAR DLAPNIPRGL LFESVPDDWL QAMSRWQALT
LHCSASHVSD QVLAEACECG VPVLCYTVNQ TEQAKALFER GVSAVFTDRL DLFSSETSAY
KGLQLGG
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