Gene Daro_3282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3282 
Symbol 
ID3567149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3533534 
End bp3534229 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content60% 
IMG OID637681755 
Productcytochrome B561 
Protein accessionYP_286482 
Protein GI71908895 
COG category[C] Energy production and conversion 
COG ID[COG3658] Cytochrome b 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.00209273 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATGA ACAGCAAACG TTTTCGCTTG TGGGATTTGC CAACGCGACT CTTCCACTGG 
TTGCTCGTCC TCTGCGTTGG TGCCGCCGTA CTCAGCGGCC AGTTGGGCGG CAAACTGATC
GTCTGGCACG GCAGGATCGG CCTCGTTATC GTTGGCTTGG TGGTTTTCCG GCTGGTCTGG
GGGCTGCTCG GTTCAACCTA TTCTCGCTTT GCCAATTTTC TGCCAACGCC AGCCACCATC
AAGGCCTATC TGCGCGGTGA ATGGCAGGGA GAGGGGCACA ATCCGCTGGG CGCCCTGTCG
GTCTTTGGCT TGCTCGCATT ACTGGCCGCG CAAGTGGCGA CCGGTTTGTT CAGTAATGAC
GACATCGCCT TCCATGGCCC CTTGGCTACG TTGGTTGGCA ATGACCTGAG CAATCGCCTG
ACGGGCATCC ACCATCTGGT TTCCGATTTG CTGATCGGCT TTGTGGTGCT GCATCTGGGG
GCGATCATCT TCTATGGTCA CGTCAAGAAA CAGAAACTGC TCAAGCCGAT GATTACCGGT
TGGGGCGAGG GCGAAGGGCC ATCGGCCACC GGCGGCGGCT GGGTCGCTTT TGTCGTCGCC
CTGGTGGTGG CGCTGGCTGC TGTTTATGGT GCCAGTGGCG GCTGGTTGCC CGAGCCGCCT
CCGCTGCCAC CAGCAGCCGA GACGCCGAAC TGGTAA
 
Protein sequence
MNMNSKRFRL WDLPTRLFHW LLVLCVGAAV LSGQLGGKLI VWHGRIGLVI VGLVVFRLVW 
GLLGSTYSRF ANFLPTPATI KAYLRGEWQG EGHNPLGALS VFGLLALLAA QVATGLFSND
DIAFHGPLAT LVGNDLSNRL TGIHHLVSDL LIGFVVLHLG AIIFYGHVKK QKLLKPMITG
WGEGEGPSAT GGGWVAFVVA LVVALAAVYG ASGGWLPEPP PLPPAAETPN W