Gene Daro_3279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3279 
SymbolyajC 
ID3566106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3530275 
End bp3530601 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content58% 
IMG OID637681752 
Productpreprotein translocase subunit YajC 
Protein accessionYP_286479 
Protein GI71908892 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value0.198543 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAGTC TCGCCCACGC CCAAACGGCG GCAGCTTCCT CTGACCCGAC TGGCGGCCTG 
ATGGGTCTGC TGCCGATGAT CCTGATGTTC GTCGTGCTGT GGTTTCTGAT GATCCGCCCG
CAAATGAAAA AGGCCAAGGA ACACAAGGCC CTGCTCGGTG CACTGGCCAA GGGCGATGAA
GTCGTCACCC AGGGCGGTAT CGTCGGCAAG ATCGTCAAGG TCGGCGAAAA CTATGTGACC
GTCGAAATCG CCGAAGGCAC CGAAGTCGTC GTGCAAAAAC CTTCGATCGG CCTGGTTCTG
CCGAAGGGCA CGCTGAAGTC GCTGTAA
 
Protein sequence
MISLAHAQTA AASSDPTGGL MGLLPMILMF VVLWFLMIRP QMKKAKEHKA LLGALAKGDE 
VVTQGGIVGK IVKVGENYVT VEIAEGTEVV VQKPSIGLVL PKGTLKSL