Gene Daro_3251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3251 
Symbol 
ID3566389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3500564 
End bp3501181 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content61% 
IMG OID637681722 
Productregulatory protein, TetR 
Protein accessionYP_286451 
Protein GI71908864 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value5.84066e-06 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAA CCGAATCCAT CCCCCCAGCC GCCCCCGCCA GCCATCACGG CAGCAAGATC 
CAGCTGACCC CCGCCGACTG GATCAAGGCT GCAACCGAAG TGCTGGTCGA CAAAAGCATC
GATGCCGTGC GCGTCGATGT ACTGGCCAAG GGAATGAAGG TGACACGGGG AAGTTTTTAC
TGGCACTTTC AGGATCGCGA TGACCTGCTC CGCCAACTGC TCAAGTCCTG GCGGGATGCG
GCGACCGAGC AGATCATCAG CCGTTTTGAA CGCAGCGGCG CCGACCCGGA AGCATTGATC
AGCGAGCTCG CCGCCCTGCC TTTCCGGGGC CAGGCAGCCG TCAATTCCGC CTCGATCGAA
CTGGCCATTC GCGCCTGGGC ACGCCGTGAC GACATGGCCC GACAGGTCGT AGACGAAGTT
GACGCCAAGC GGCTGTCCTA CGTCTCACAG TGTTTTGTCG CTCTCGGCTT CAGTTTCCAG
GAAGCCGGCA TGCGCGCCTT CCTGCTCTAC AGCTACATGA TCAGCGAATC GCTGATGCGC
GGCCAGGGCA CCGAATCCCA GCGCCAGCAG CGGCGGGATT TCATCAAAAA TCTCTTGCTG
AAAAAATCAG ACGCCTGA
 
Protein sequence
MSETESIPPA APASHHGSKI QLTPADWIKA ATEVLVDKSI DAVRVDVLAK GMKVTRGSFY 
WHFQDRDDLL RQLLKSWRDA ATEQIISRFE RSGADPEALI SELAALPFRG QAAVNSASIE
LAIRAWARRD DMARQVVDEV DAKRLSYVSQ CFVALGFSFQ EAGMRAFLLY SYMISESLMR
GQGTESQRQQ RRDFIKNLLL KKSDA