Gene Daro_3250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3250 
Symbol 
ID3566388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3499443 
End bp3500264 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content61% 
IMG OID637681721 
ProductAlpha/beta hydrolase fold 
Protein accessionYP_286450 
Protein GI71908863 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.000000000180136 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGC ACCCCGGCAT CGGCAAGACC CTTTTGGCAG CAGATCATCA AACGAATTAC 
CTGGAGCAGG GCGAGGGCAA GCCGCTGTTC CTGTTGCATG GTTCCGGCCC TGGCGTTTCG
GCCTGGACCA ACTGGAGCAA GGTCATGCTC GACCTGGCGC AAAACTTTCG CGTCATCGCA
CCGGATATCG CCGGCTTCGG TTTTACCGAG TTCAAGTCCG ACAACAAGTA CGACATCAAA
CTGTGGGTTC GCCACCTGAC CGGCATCATG GATGCGCTGG GTATCGACAA GGCGTCCTTC
GTTGGTAACT CCTTCGGCGG TGCGCTATCG ATCGGCCTCG CCCTGTTTGC GCCGCAGCGT
GTCGACAAGC TGGTACTGCT TGGCACGCCG GCCGGTGAGT TCGTGCAGAC CCCCGGCCTG
CGTTCGGCCT GGGAATATGA GCCGTCGATG GAAAACATGG AGCGGACGAT GCGCCTGTTC
CCGTTCAACC AGGCCATCAT CACCGAAGAA ATGATCCGCA CCCGCTACGA GGCCAGCGCC
CGTCCCGGGG CTCAGGATGC CTTGCGCCGG CTGTTGCCTA GGCCGAATGC TGAAGGCCCG
ACTATGGTCA AGGGCTTCCC GGAGGCTTCG GTCGCCAAGA TCGAAGCGCC GACGCTGGTC
CTGCATGGCC GCGAAGATGC AGTCGTGCCG CCGCAGTGCG GCTTCCTGCT GGCCAATGCC
ATTCCCAAAG CCGAGTTGCA TCTGTTCGGA CAGTGCGGGC ATTGGGTTCA GACCGAGCAT
CGTGAGCGCT TCCTGCAACT GGTGCGCGAT TTCTGCGCCT GA
 
Protein sequence
MEKHPGIGKT LLAADHQTNY LEQGEGKPLF LLHGSGPGVS AWTNWSKVML DLAQNFRVIA 
PDIAGFGFTE FKSDNKYDIK LWVRHLTGIM DALGIDKASF VGNSFGGALS IGLALFAPQR
VDKLVLLGTP AGEFVQTPGL RSAWEYEPSM ENMERTMRLF PFNQAIITEE MIRTRYEASA
RPGAQDALRR LLPRPNAEGP TMVKGFPEAS VAKIEAPTLV LHGREDAVVP PQCGFLLANA
IPKAELHLFG QCGHWVQTEH RERFLQLVRD FCA