Gene Daro_3248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3248 
Symbol 
ID3566386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3498275 
End bp3499111 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content61% 
IMG OID637681719 
Productprotocatechuate 4,5-dioxygenase subunit beta 
Protein accessionYP_286448 
Protein GI71908861 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.000000000626478 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGAAAAA TTGTAGGCGG CTTTTTGGTG CCGCATGACC CGGTCATGTT CGTGATTCCT 
GATGCGCCGG CGCCCGATGT GGCAAAGCGC ATGTGGAGCG CGTTCGAAAC CTGTGCCGAA
CGCCTGGCTG CGTTGAATGC AACCAGCGTC GTAATCATCG GGGCCGACCA CTATTTCAAT
TTTGGCACCG GCTGCCTGCC GCAGTACCTG ATCGGCACCG GTGACGTCGA TGGTCCGCTC
GATGTCCTGC CCGGCCTGAA GCGCCAGGTC ATTCCGGCCA GCGAAAAACT GGCGAGTTTC
ATTGCCGAGC ATGGTCACGA CAACGGTTTC GACTGGGCGG TAGCACGTGC CTTCACGGTC
GATCATGCCG TGGCCATTCC GGATCGCCTG ATTGTCGATC CGGTACGCGC CAAGGGGCAG
GCTATCGGCA CCATTCCAGT CTATATCGCG GCCGGCGTCG ATCCGTTCAT CAAGATGAAG
CGGGCCATCG AACTCGGTGG CGCCATCAAG GCGGCTGTCG AGGCCATGCC CGATGACGAG
CGCGTGGTCG TGATCGGCAG CGGCGGCATC AGCCACTGGG TGGGTACGCC CGAGATGGGC
AAGGTCAACG AGGCTTTCGA CCACGAAATC ATGGGCTATG CCTGTGCCGG TGATCTGGCA
GCCATGCAGG CATTGAGCGA CGACTACATC CTCGAAAACG GTGGCAACGG TGGCATGGAA
ATCCGCCAGT GGGCCGTGGC GATGGGCGCG ATGCCCGGCG CCAAGGGCGA AATCATCGAC
TACGCCCCGG TCAGGGAATG GGTGACCGGT CTGGGCTTCG TCCAATTGTT TGCTTGA
 
Protein sequence
MGKIVGGFLV PHDPVMFVIP DAPAPDVAKR MWSAFETCAE RLAALNATSV VIIGADHYFN 
FGTGCLPQYL IGTGDVDGPL DVLPGLKRQV IPASEKLASF IAEHGHDNGF DWAVARAFTV
DHAVAIPDRL IVDPVRAKGQ AIGTIPVYIA AGVDPFIKMK RAIELGGAIK AAVEAMPDDE
RVVVIGSGGI SHWVGTPEMG KVNEAFDHEI MGYACAGDLA AMQALSDDYI LENGGNGGME
IRQWAVAMGA MPGAKGEIID YAPVREWVTG LGFVQLFA