Gene Daro_3229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3229 
Symbol 
ID3566575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3479196 
End bp3480779 
Gene Length1584 bp 
Protein Length527 aa 
Translation table11 
GC content61% 
IMG OID637681700 
Productalkaline phosphatase 
Protein accessionYP_286429 
Protein GI71908842 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1785] Alkaline phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value0.657228 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.96521 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAAGT TCGTTCGCAC TGCCACCGCC GTGGCTGTTG CTTTCGCAGT TTCCGCCGGT 
GCCACCCCGG TATTTTCTGC TGCTCCCGTC GTTCAGGGTC CGGAATCCGT TCAGGACTGG
TACAAGCAGG GCCAGAATTT CATTCGCCAC AGCGAAAGAA TGGTCGATAA CCGTCATCAC
GCCAAGAATG TGATTCTCTT CGTTGGCGAT GGCATGGGTA TTTCGACGAT TACCGCTGCC
CGCATCCTGG AAGGCCAGCT CCATGGCAAG CCGGGCGAAG AAAACCGCCT GTCCTTCGAA
CATTTCCCGA ACGTCGGTCT TTCCAAGACC TACTCCTGGG ATCAGCAGAC CCCGGATTCG
GCGCCGACGA TGACCGCCAT GGTCACCGGC TACAAGGCCC GTGAAGGCAT GCTGTCAGTC
GACCATCTGA CCTCCCGTGG CGAATGCGAT GCCGCCGTGA TCGCCAAGCA CGCGCTGCCG
ACCATCCTCG AGCAGGCTGC CGCTGCCGGC AAGTCGACCG GTGTCGTGTC GACCGCCCGC
CTGACCCACG CCACCCCGGC TGCAACCTAC TCGCATACCT CGGTGCGCGA CTGGGAATCC
GATTCGGACA TGAATTCCTT CTTCGCTGCC AATGTGGCGA CCTGCAAGGC CAAGGGCGTG
ACGCTGGTCA AGGATATCGC ACGCCAACTG ATCGAAGTGT CGCCGGCCGT CAGGGCCAGC
CTGAAGGTGG CGATGGGCGG TGGCCGCAGC TACTTCCTGC CGAAGACCTT GACCGACCAG
GAATACGCCA AGAGTGGCAA GCGCAGCGAC GGTCGTGATC TGACCGCCGA ATGGGTCAGC
ACCCGCGGCG CCAAGGCCCA GTACGTCTGG AACAAGGCTG GTTTCGAAGC AATCGATCCG
GCCAAGACCG AATACCTGCT CGGCCTGTTC GAAAACTCGC ACATGCAGTA CGAAGCTGAT
CGCGCCACCG ACAAGGCTGG CGAGCCGTCG CTGACCGAGA TGACTGAAAA GTCCATCAAG
ATGCTCGACA AGAACAAGCG CGGCTACTTC CTGCACGTTG AAGGCGGTCG TGTTGACCAC
GCTCACCACG CCGGCAATGC CCAGCGTGCG CTGCTCGATG CCATCGAACT GGCCAAGGCG
GTCAAGAAGG CCTACGAAAT GACCGATCCG CGCGAAACGC TGATCATCGT GACGGCCGAC
CACAGCCACA CCTTCACCAT CGCCGGTTAC CCGCACCGCG GCAACAACAT CCTCGGCTTG
TCTGCCGCCG TGCCGGCCAA TGACGGCGAT CCGGTCAGCA ACGACAAGGC CAGCGATGGC
CTGCCCTACA CCACGCTGGG TTACCAGAAT GGTCCGGGTG CTGTTGGCGG TTCGTCGGCT
GCCGTCAGCC GCAGTACCGA TCTGACCAGT GTCGATACCA CCGCGCTGAA CTTCCTGCAG
CAGGCTTTGG TGCCGTTGGG TTCGGAAACC CATGCCGGTG AAGATGTCGC CATCTACGCG
ACGGGTCCGA AGTCCTCTCT GGTTCATGGC AGCATGGAAC AGAACTGGAT CTACCACGTC
ATGAAGGAAG CCTTCGGCTT CTGA
 
Protein sequence
MHKFVRTATA VAVAFAVSAG ATPVFSAAPV VQGPESVQDW YKQGQNFIRH SERMVDNRHH 
AKNVILFVGD GMGISTITAA RILEGQLHGK PGEENRLSFE HFPNVGLSKT YSWDQQTPDS
APTMTAMVTG YKAREGMLSV DHLTSRGECD AAVIAKHALP TILEQAAAAG KSTGVVSTAR
LTHATPAATY SHTSVRDWES DSDMNSFFAA NVATCKAKGV TLVKDIARQL IEVSPAVRAS
LKVAMGGGRS YFLPKTLTDQ EYAKSGKRSD GRDLTAEWVS TRGAKAQYVW NKAGFEAIDP
AKTEYLLGLF ENSHMQYEAD RATDKAGEPS LTEMTEKSIK MLDKNKRGYF LHVEGGRVDH
AHHAGNAQRA LLDAIELAKA VKKAYEMTDP RETLIIVTAD HSHTFTIAGY PHRGNNILGL
SAAVPANDGD PVSNDKASDG LPYTTLGYQN GPGAVGGSSA AVSRSTDLTS VDTTALNFLQ
QALVPLGSET HAGEDVAIYA TGPKSSLVHG SMEQNWIYHV MKEAFGF