Gene Daro_3213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3213 
Symbol 
ID3566598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3463612 
End bp3464280 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content54% 
IMG OID637681684 
Producthypothetical protein 
Protein accessionYP_286413 
Protein GI71908826 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value0.142503 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.285485 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGATA GTCTCGCCCA CGTTTTTCAG CCTCTCGCTA TCAAGCAATT CAACTTGTTA 
CTGGTCATTT ATCTGGTTGC CATCACCGCC GAAGCGATGT CCGGTGCCCT GGCAGCAGGA
CGTCGCAACA TGGATTTCTT CGGGGTGGCC GTGATCGCCT TTGTCACCGC TCTGGGAGGC
GGAACCATCA GGGATGTCGT TCTTGGCAAT TACCCGATTG GTTGGACGCA GCATCCCGAA
TACGTGTATC TGGTGACCCT GGCTGGTTTG GCCACGACCT TGCTTGCCAA GTTCATGCAC
CACCTGAAAA ACGTCTTTCT GATGCTGGAT GCACTCGGGT TGGTCGCCTT CTCGCTGATT
GGTTGCAATG TGGCCCTGCA ACTTGAATAC CCGACGGTAG TAGTCATCAT GGCCGGCATG
CTGACGGGGA TATGCGGAGG CGTTTTGCGC GATGTGCTGT GCAACCAGGT GCCCGTCGTA
TTTTGCCGGG AGCTTTATGC CAGCGTGTCA CTCTTTGTTT GCGCCCTATT TCTCGCGTTG
AGGTCGCTGG ACTTGGATGC CAACCTCAAT ACGATGATGT GCTTCATTCT CGGCTTCGGA
TTTCGCATGC TGGCGCTACG TTTGAGCTGG AAGCTTCCGA CCTTCTCCTA TCAGCAGCGA
TGGGATTAG
 
Protein sequence
MFDSLAHVFQ PLAIKQFNLL LVIYLVAITA EAMSGALAAG RRNMDFFGVA VIAFVTALGG 
GTIRDVVLGN YPIGWTQHPE YVYLVTLAGL ATTLLAKFMH HLKNVFLMLD ALGLVAFSLI
GCNVALQLEY PTVVVIMAGM LTGICGGVLR DVLCNQVPVV FCRELYASVS LFVCALFLAL
RSLDLDANLN TMMCFILGFG FRMLALRLSW KLPTFSYQQR WD