Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_3213 |
Symbol | |
ID | 3566598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 3463612 |
End bp | 3464280 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637681684 |
Product | hypothetical protein |
Protein accession | YP_286413 |
Protein GI | 71908826 |
COG category | [S] Function unknown |
COG ID | [COG2860] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 0.142503 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.285485 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGATA GTCTCGCCCA CGTTTTTCAG CCTCTCGCTA TCAAGCAATT CAACTTGTTA CTGGTCATTT ATCTGGTTGC CATCACCGCC GAAGCGATGT CCGGTGCCCT GGCAGCAGGA CGTCGCAACA TGGATTTCTT CGGGGTGGCC GTGATCGCCT TTGTCACCGC TCTGGGAGGC GGAACCATCA GGGATGTCGT TCTTGGCAAT TACCCGATTG GTTGGACGCA GCATCCCGAA TACGTGTATC TGGTGACCCT GGCTGGTTTG GCCACGACCT TGCTTGCCAA GTTCATGCAC CACCTGAAAA ACGTCTTTCT GATGCTGGAT GCACTCGGGT TGGTCGCCTT CTCGCTGATT GGTTGCAATG TGGCCCTGCA ACTTGAATAC CCGACGGTAG TAGTCATCAT GGCCGGCATG CTGACGGGGA TATGCGGAGG CGTTTTGCGC GATGTGCTGT GCAACCAGGT GCCCGTCGTA TTTTGCCGGG AGCTTTATGC CAGCGTGTCA CTCTTTGTTT GCGCCCTATT TCTCGCGTTG AGGTCGCTGG ACTTGGATGC CAACCTCAAT ACGATGATGT GCTTCATTCT CGGCTTCGGA TTTCGCATGC TGGCGCTACG TTTGAGCTGG AAGCTTCCGA CCTTCTCCTA TCAGCAGCGA TGGGATTAG
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Protein sequence | MFDSLAHVFQ PLAIKQFNLL LVIYLVAITA EAMSGALAAG RRNMDFFGVA VIAFVTALGG GTIRDVVLGN YPIGWTQHPE YVYLVTLAGL ATTLLAKFMH HLKNVFLMLD ALGLVAFSLI GCNVALQLEY PTVVVIMAGM LTGICGGVLR DVLCNQVPVV FCRELYASVS LFVCALFLAL RSLDLDANLN TMMCFILGFG FRMLALRLSW KLPTFSYQQR WD
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