Gene Daro_3209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3209 
Symbol 
ID3566594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3460153 
End bp3460566 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content59% 
IMG OID637681680 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_286409 
Protein GI71908822 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value5.37129e-08 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.265512 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTTC AGCGCGGCCG TAGCCGGGAA GAGCCGGAAA TCAACCTGAT CCCGATGATC 
GACGTGTTAC TGGTCATCAT CATCTTCCTG ATGCTGACCA CCACTTACGC CAAGTTCTCC
GGGCTGGAAA TCAACCTGCC GACGGCCGAT GCCAGCAAGC AGGCCGAGCA GCCGAACGAG
GTCGATGTCG CCGTGACCGC CAGTGGTCAG GTCCTGGTCA ATAAATCGCC TTTGGCCACC
ACCGACGTCA AGAGCATCGC TGATGGCTTG CGCCGGGCTG CCGGTAGCCG TGAGGATCCG
CTGATCGTCA TCAATGCCGA CGCCAAGGCC ACGCATCAAA GCGTGGTCGA CGTGATGCAG
GCGGCGCAGA CGGCCGGTTA TCCACATATT TCCTTCGCCA CCCAGAATCG CTGA
 
Protein sequence
MNFQRGRSRE EPEINLIPMI DVLLVIIIFL MLTTTYAKFS GLEINLPTAD ASKQAEQPNE 
VDVAVTASGQ VLVNKSPLAT TDVKSIADGL RRAAGSREDP LIVINADAKA THQSVVDVMQ
AAQTAGYPHI SFATQNR