Gene Daro_3180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3180 
Symbol 
ID3567180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3419484 
End bp3420176 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content64% 
IMG OID637681651 
ProductDnaA regulatory inactivator Hda 
Protein accessionYP_286380 
Protein GI71908793 
COG category[L] Replication, recombination and repair 
COG ID[COG0593] ATPase involved in DNA replication initiation 
TIGRFAM ID[TIGR03420] DnaA regulatory inactivator Hda 


Plasmid Coverage information

Num covering plasmid clones73 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAAAT CGCGGCCCCT GTTTCATTCC GATCTCCCGA TGCGCCAGCT AATTCTCGAC 
TTGCTGCCCG AAAGCCCGCC CACGCTGGAT AACTTCGTCG CCGGGGGCAA CGCGGAAACG
CTCGCCCTAC TGACCGAATG GCTGGCCGGC ACGCGCACCG ACACCTCGTT CTGCCTGTGG
GGCGAAGCTG GATCGGGACG CTCGCACTTG CTGCAGGCGA GCGGCTTTAC CTATGTCGAC
GCAGCGCTCG ACCCGGCACT GAAGACGGCC CCAGCGGCCG AGCAACTGGC CGTCGACCAC
GTCGAAGCGC TGGACGAAAC CGGCCAGATC GCACTGTTCA ACCATTTCAA CCGCCTCAAG
ATGGCCTCTG GCATGCTCTT GACCGCCGCT GACCAGCCGC CGGCCCACCT GGCATTGCGC
GAAGACTTGC GCACCCGCTT GGGGTCTGGC CTGATCTGCC GGCTGCAACC GCTGTCCGAT
GCCGAAAAAG CCGCCGCGCT GGGCGCCCAG GCGAAAGAAC GCGCCCTGAA GCTGACACCG
GAACTGATCG ATTACCTGAT GCGCCACGCC CCGCGCGACA TGCGCACGCT ATCGACCATC
ATCGTCGCCC TCGACGAATA CACCCTCGAA CAAAAGCGCC CGGTGACCCT GCCACTGCTG
CGCGAGCTGC TCAACATGGA AGCTTCATCA TGA
 
Protein sequence
MLKSRPLFHS DLPMRQLILD LLPESPPTLD NFVAGGNAET LALLTEWLAG TRTDTSFCLW 
GEAGSGRSHL LQASGFTYVD AALDPALKTA PAAEQLAVDH VEALDETGQI ALFNHFNRLK
MASGMLLTAA DQPPAHLALR EDLRTRLGSG LICRLQPLSD AEKAAALGAQ AKERALKLTP
ELIDYLMRHA PRDMRTLSTI IVALDEYTLE QKRPVTLPLL RELLNMEASS