Gene Daro_3139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3139 
Symbol 
ID3567640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3381294 
End bp3381896 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content62% 
IMG OID637681610 
Productdi-heme cytochrome c, class IC 
Protein accessionYP_286339 
Protein GI71908752 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones66 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCGAC GTTTTGTCGT TGCCGCCGCG GCACTTTTTG CGGTGGCCGC GCAGGCCGTG 
GAGGATCAGG CGCTGATGCA GCGTGGCGAA GAGCAGGTCA TGGGCAAATG TTTTCTGTGC
CACGGTGCGA CCGGTGACAG TTCCAGTCCG CTCTATCCGA AGCTGGCTGG CCAGAACGAG
GCCTATCTGC TCAAGCAGTT ACGTAACTTC AAGTCGGGCG AGCGCGAGAG TAGCGACATG
CGCAAGATCG TGGCCGACAT GGACGATAAC GACATGCGGG CGGCGGCGCA TTATTTCAGC
CACCAGGAGC CGAGCCGGGG CAAGTCGGCT TACGGGGAGA TGCGCGCTAT CGGCGAGCAG
ATCTACAAGC AGGGCAACGC CGCCAAGGGG CTGACGCCCT GCCGCGAGTG CCACGGCGAG
ACCGGGACCG GATCGGACGT GCTGCCGCGC ATCGCTGGCC AGCATACGCT CTATATCGAA
ACCCAATTGA CGCTGTTCGA GGAGCGCAAG CGGACCAACG ACAATGCACT GATGCAGGAC
ATTGCCAAGC GTCTGACCAC CGATGAAATT CGCGCCGTGG CCGAGTTTCT GCGCGCCCTG
TGA
 
Protein sequence
MIRRFVVAAA ALFAVAAQAV EDQALMQRGE EQVMGKCFLC HGATGDSSSP LYPKLAGQNE 
AYLLKQLRNF KSGERESSDM RKIVADMDDN DMRAAAHYFS HQEPSRGKSA YGEMRAIGEQ
IYKQGNAAKG LTPCRECHGE TGTGSDVLPR IAGQHTLYIE TQLTLFEERK RTNDNALMQD
IAKRLTTDEI RAVAEFLRAL