Gene Daro_3028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3028 
Symbol 
ID3568696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3272508 
End bp3273002 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content53% 
IMG OID637681499 
Productputative nucleotide-binding protein 
Protein accessionYP_286228 
Protein GI71908641 
COG category[S] Function unknown 
COG ID[COG1666] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value0.208181 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.91414 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAGCT TTGACTTCAC CTCTGAAGCG GATATGGTTG GCCTGAAGAA CGCCATCGAC 
GTTACTTCGC GCCAGATCGA CAATCGTTAC GACTTCAAGG GTACTAGTGC CAAGGTCGAG
TTGAACGAGA AGGACAAGGT CATCACGCTG TGGGGCGATT CCGACTTCCA GCTCGATCAG
ATCAAGGATC TGCTTTTCCC GGCCATGGAA AAGAAGGAGA AGGAAAGCGT CAAGCGCCTG
GATCACCAGA AGGTGGTCAG CGTCTCCGGC AACAAGGTCA AGCAGGAGAT GAAAATCAAG
GATGGAATCG ATAGCGACCT GGCCAAGAAG ATCGTCAAGT TGGTTAAGGA CGGCAAGCTC
AAGGTCCAGG CTTCGATCCA GGGCGATACC GTGCGGGTCC AGGGGGCCAA GCGCGATGAT
CTGCAGGGCT GTATTGCGCT GATTACCAAG TCGATTACCG ATTTTCCGAT CAAGTACGGT
AATTTCCGAG ACTGA
 
Protein sequence
MPSFDFTSEA DMVGLKNAID VTSRQIDNRY DFKGTSAKVE LNEKDKVITL WGDSDFQLDQ 
IKDLLFPAME KKEKESVKRL DHQKVVSVSG NKVKQEMKIK DGIDSDLAKK IVKLVKDGKL
KVQASIQGDT VRVQGAKRDD LQGCIALITK SITDFPIKYG NFRD