Gene Daro_3005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3005 
Symbol 
ID3567318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3242897 
End bp3243982 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content59% 
IMG OID637681476 
Productresponse regulator receiver 
Protein accessionYP_286205 
Protein GI71908618 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value0.931132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCCA GCCAGCCGAC CATACTGATT GTCGATGACA CCCCTGAGAA CCTCAGCGTT 
CTGGGGGAGC TATTGCAGCC CACGTATCGC GTGCGAGCCG CGAATTCCGG ACGACGTGCC
TTGCAGATTG CCCTTGGCAC CCCAACGCCC GACCTGATTC TCCTCGACGT AATGATGCCG
GAAATGGACG GCTACGACGT TCTCACCGAA TTGCAGGCAT CGGCAGCCAC CCGCAGTATT
CCTGTGATCT TTGTCACTGC GATGGATGGC ACGGAAGACG AAGAACGCGG CCTCGATCAT
GGTGCGGTGG ACTACATCAC CAAGCCGATC CGCCCCAGCA TTGTATTGGC CCGGGTGCGC
ACCCAACTTG AACTCAAGGC CGCCCGCGAC ATCCTCAGTG ACCAGAACAG CTTTCTCGAA
GCCGAAGTCG CCCGCCGCAT GCGCGAAAAT CAGCTGATCC AGGAAGTCAG CATCCATGCA
CTGGCCCGCC TCGCTGAAAC ACGCGACCCT GAAACCGGCA AGCACCTCCG GCGGACACAG
GAATACGTGC TGACGCTGGC CAGGACGTTG CGCAACCACC CCCGTTTCAC CAACTATCTG
GATGAGCGGA CGATCAACGC GCTCGCCCAG TCAGCGCCAT TGCACGACAT CGGCAAAGTC
GGAATCCCCG ATCACATCCT GCTCAAACCC GGCAAGCTGA CGCCGGAAGA ATGGGAAATC
ATGAAGACAC ATGCCGAGCT CGGCAGCAAC GCTATTGCCC AGGCGGAAGC AGACGCCGAA
AAGCCTGTCG AATTTCTCGC CATTGCCAAG CAGATAGCAC GCTCGCACCA CGAAAGATGG
GATGGTAGCG GCTACCCGGA CCGCCTCGCC GGTGACGACA TTCCGATTGC AGCCCGCCTA
ATGGCACTGG CCGATGTTTT CGATGCGCTG ACGTGCAAGC GGGTCTACAA ACCCGCCTTT
TCCTTCGATG ACGCTTACCG CATCATCGTC GACGGCAGCG GCAACCATTT TGACCCTGAT
GTAGCCAACG CCTTCATCCA GGAATACGAG ACCTTCATCA GCATCGCCAA GACCTACGCT
GAATAG
 
Protein sequence
MGASQPTILI VDDTPENLSV LGELLQPTYR VRAANSGRRA LQIALGTPTP DLILLDVMMP 
EMDGYDVLTE LQASAATRSI PVIFVTAMDG TEDEERGLDH GAVDYITKPI RPSIVLARVR
TQLELKAARD ILSDQNSFLE AEVARRMREN QLIQEVSIHA LARLAETRDP ETGKHLRRTQ
EYVLTLARTL RNHPRFTNYL DERTINALAQ SAPLHDIGKV GIPDHILLKP GKLTPEEWEI
MKTHAELGSN AIAQAEADAE KPVEFLAIAK QIARSHHERW DGSGYPDRLA GDDIPIAARL
MALADVFDAL TCKRVYKPAF SFDDAYRIIV DGSGNHFDPD VANAFIQEYE TFISIAKTYA
E