Gene Daro_2946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2946 
Symbol 
ID3566136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3180722 
End bp3183055 
Gene Length2334 bp 
Protein Length777 aa 
Translation table11 
GC content58% 
IMG OID637681415 
Productresponse regulator receiver:ATP-binding region, ATPase-like:histidine kinase, HAMP region:histidine kinase A, N-terminal 
Protein accessionYP_286146 
Protein GI71908559 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCAT CGCGACAACG CGAATGGCGT CTACCCGTCT ATCTTGGCTT GTTGCTGACC 
CTGACCTCGG TACTCACCTT CCTGATTGTT GGCGGTGTTT TTCTGCTCAC CCGCATTCCG
CAGATGGAAG AGGAAATCCG TGCTCGTGGC GAGAGCGAAG CGCGCGAACT GGCTTTCCGC
ATCGAGATGC AGATGCTAGC CCAACAGGAA CAAATGGCGC TGGTGGCGAC AGCCTTGCGC
AACACGCAGT CGCCATCAAC GCTCATCGCC GACGCCATCG GTGAAGGCAA AGTCTTTCGT
GCGCTCTACC TGATCTCGTC TCAAGGCGAC GTGCTGGCGG CGGGACTCAC GCCGGAATAC
CGGCATCTGG AAAGCGAAGT CATCGGTAGC GACCTCTCCG GTACCCCGCT TTTTCAGGAG
GTGCGCCAAC GGCGCGAGAT CGTCTGGAGC GACAAGTATC TCTCCGCACT GAGCGGTGTC
ATCACGGTGG GCCTGGCCAT TCCCATCGCA GGCGACCAGG TTCTGCTCGC CGAAATACCG
ATCAACTACC TGCTCAGCAT ACTCGACCGC AACCCGGCCA ATAAGCAAAG GTCAATCTGG
GTAGTCGACC AGCGGGGCGA ACTGCTGGCC GATACACAGG CCTTCATGCG TCCCGGCGAA
CTCAATATTT ACAACTCGCC CGTGCTCAAT GCCGTGCTGA AGGACGAGCC CTTGCCAAGC
CGCTTCAGCT TCAATGGGCA CGACTACTAC GTTGGAGGAG CGCGTTCCGA AGCGCTTGGC
TGGTCGTTCA TCTCGCGCCT GCCGGCGGGA TTTGATCACC CGGAAATCCG CATGACGACC
CTGATCGTCT GCGGTGGCTT CCTGGCTTCC CTGGTTATCG GTGCCTTGCT CGCAATGTAT
GGCGCATCCC GTCTCCTCAG GCCGCTTGCC CGGGTCGTCA AGCAAGCGCA CGAGGTTGCC
AGCGGCCGGC CCGTCCGGCT CTGGCCGCAA GGCCGAATCA AGGAATTCAA CGACCTTTCC
ACCGACATCG GTCAGATGGC ATCAGCCATT CTCGAACGCG AACACGAACT GCGTGAACTT
AATTCGAAAC TCGAAGCGCG CGTCGTGAAA CGCACCGAGG AGTTGTCGCG CGCCAAGGAA
GTGGCAGAGG AAGCGAACCG GGCAAAATCG ACCTTCCTGG CGAACATGAG CCACGAAATA
CGTACGCCTC TTAACGCCAT CGCCGGCATG GCCGCACTGA TGCGGCGTGC CGGCCTAGAG
CAGGAACAGG AGACTCGCCT GGACAAGCTG GAAGCCGCCG GCGGGCATCT GCTCGAAATC
ATCAACATGG TGCTAGACCT CTCGAAGATC GAAGCAGGCA AGCTCACCCT GCAAGAGGAC
GTTTTCCCAC TCGGCAGTCT GTTCGAAAAC GTTATTTCCA TGCTTCACGA ACGGGCATTG
GAAAAGCACC TGTCTCTAAG CTTCGAACTG CCCGATCTCC CGCCTTTACT GTGCGGTGAT
CGCATCAGAC TGCAGCAGAG CCTGCTCAAC TATGCGACCA ACGCGGTGAA ATTCACCGAA
CAGGGCAGCG TCTTCATGAC GGCGGCCTTG TTGGAAGAAA CCGAGGAAGA CGTATTGATC
CGTTTCGAGG TGCGCGACAC CGGTATCGGA ATCGCACCCG AGGTACAGAA ACGCCTATTC
AAGGCTTTCG AACAAGCCGA TGGCTCGACA ACCCGCCAAT ATGGCGGAAC CGGTCTGGGG
CTTGCGATTA CCGCCAAGAT TGCAGCAGCC ATGGGAGGTG AAACTGGCTT GGAGAGCGAA
ATCGGGAATG GGAGTACTTT CTGGTTCACT GCCCGCTTGC GCAAGGCAAT ACTGGGCAGC
CAGGAGGCGC ATCAAGAACC GACCTGCGGT GCTGAGCAAG GTTTGCTCAA GGATTTTGCC
GGGATTCGTG TTCTATTGGT CGACGATGAG CCCATTAATC GTGAAATCAC GCAAATTCTG
CTTGAAGATC TGCATTTTCG GATCGATTCA GCCGAAAACG GCGAAGAAGC GCTTGCCCTC
GCTTGTATTT ATCCCTATGA CCTGATTCTG ATGGACATGC AGATGCCGGT GATGGACGGC
CTGGAAGCGA CCCGGCGCAT TCGTGCGCTA CCCGATGGTC ACCGCTTCCT GATCATTGCC
ATGACAGCCA ATGCTTTTTC CGAAGACCGT GAGCGCTGTC TGGCAGCCGG AATGGACGAT
TTCACGACCA AGCCTATCGA TCCCGAAGCT TTCTTCAGCC TGATTCACCG TCAGCTTAGT
GTCCGAAATG ATCCGGGGCG GAGGCCAACC GGGCCAGGCC GTGAAAGCGC TTGA
 
Protein sequence
MKASRQREWR LPVYLGLLLT LTSVLTFLIV GGVFLLTRIP QMEEEIRARG ESEARELAFR 
IEMQMLAQQE QMALVATALR NTQSPSTLIA DAIGEGKVFR ALYLISSQGD VLAAGLTPEY
RHLESEVIGS DLSGTPLFQE VRQRREIVWS DKYLSALSGV ITVGLAIPIA GDQVLLAEIP
INYLLSILDR NPANKQRSIW VVDQRGELLA DTQAFMRPGE LNIYNSPVLN AVLKDEPLPS
RFSFNGHDYY VGGARSEALG WSFISRLPAG FDHPEIRMTT LIVCGGFLAS LVIGALLAMY
GASRLLRPLA RVVKQAHEVA SGRPVRLWPQ GRIKEFNDLS TDIGQMASAI LEREHELREL
NSKLEARVVK RTEELSRAKE VAEEANRAKS TFLANMSHEI RTPLNAIAGM AALMRRAGLE
QEQETRLDKL EAAGGHLLEI INMVLDLSKI EAGKLTLQED VFPLGSLFEN VISMLHERAL
EKHLSLSFEL PDLPPLLCGD RIRLQQSLLN YATNAVKFTE QGSVFMTAAL LEETEEDVLI
RFEVRDTGIG IAPEVQKRLF KAFEQADGST TRQYGGTGLG LAITAKIAAA MGGETGLESE
IGNGSTFWFT ARLRKAILGS QEAHQEPTCG AEQGLLKDFA GIRVLLVDDE PINREITQIL
LEDLHFRIDS AENGEEALAL ACIYPYDLIL MDMQMPVMDG LEATRRIRAL PDGHRFLIIA
MTANAFSEDR ERCLAAGMDD FTTKPIDPEA FFSLIHRQLS VRNDPGRRPT GPGRESA