Gene Daro_2918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2918 
Symbol 
ID3566265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3141977 
End bp3142456 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content58% 
IMG OID637681387 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_286118 
Protein GI71908531 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value0.996999 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.248939 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACTGA GTGCCTTTTC CGACTACAGC CTGCGCGTTC TGATGTACCT CGGCGCGCAA 
ACAGACCGGC TGGCGACGAT CGCCGAAATT GCCGCCGCCC ACGATATTTC AAAGAGTCAC
CTGATGAAGG TGGCCTATCA GCTCGGGCGA GGCGGATATA TCGAGACCGT ACGCGGCAAG
GGCGGCGGCC TGCGCTTGGC GCATGAACCG CAGGAAATTG TCGTCGGCGA GGTGATTCGC
CAGACCGAAA GCGATTTCAC GCTGGCCGAA TGTTTTGCTG ATAAAAGCAC CTGCCGGATT
CAGGGCGCCT GCTGCCTGCC TGCGATTCTC AATGAAGCCT TGAAGGCCAT GTTCCTCGTC
CTGGACGGCT ACACCCTGGC CGACCTGCTA CGGACGCCAG GTAAGCTGAT GCCGCTAGCA
GGCTGTGATC TGACTATTGG TCAGGGGAAA AAGGCTGCTC CTACATGTAT GCGAAGCTAA
 
Protein sequence
MRLSAFSDYS LRVLMYLGAQ TDRLATIAEI AAAHDISKSH LMKVAYQLGR GGYIETVRGK 
GGGLRLAHEP QEIVVGEVIR QTESDFTLAE CFADKSTCRI QGACCLPAIL NEALKAMFLV
LDGYTLADLL RTPGKLMPLA GCDLTIGQGK KAAPTCMRS