Gene Daro_2907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2907 
Symbol 
ID3566254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3130251 
End bp3131570 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content62% 
IMG OID637681376 
Productsignal transduction protein 
Protein accessionYP_286107 
Protein GI71908520 
COG category[T] Signal transduction mechanisms 
COG ID[COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.0386149 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.411691 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCAACG GCCTGAAAAC ACTGTTCGGC AAGAAGCCCG ACACCCCGGC CCCGCCTGAA 
TCGACTGGCC AACCAGGCCG GCTGGCCAGG GACACCCCGT TCCTTCGCCG CGAGGCTGTC
TTCGACCGCA GCAACCGCCT TTCCGGGCAC CTCTTTCGGC TGCAACAATC GACCGTACTT
GCGAATGCTG ACGATGCCGA ACAACGCGAG CTCGACCAGG CCCTGCTCGA CACGCTGAAC
GCCAGCCGCG ATGCCTGGAA CACCACCCTC GCCTTCATCC CGCTCAGCTC ATCCAGTCTT
GATCTCCCCG CTGTCGAGCG CCTGAAGAAG GCCAACATCG TCCTCCTCAT CCAGCTGGCG
CCTGAAGCCG AAGCGGACAT GGTCTGCGAG GCCATCGACC AACTGCATGT TCGCGGCTTG
CAGGTCGGGG TTTTCCGCCA GCCGAAACAC CGCGCTTTTG CCAAGGTCAT CCAGCGAGTG
GATTACGCCG CCATCGATAT TGGTGGCAAC GAGGCCAATG CGGTTCGAGA CTTTTCCGCC
GCCATCCGTT CCGGCGAGCG CGAACACCCA ATCCGGCTTT TCGCCTGCAA TATCGATACC
TTCGACGACC ACCTTTTCTG CCATCAGTGG CATTTCGAAA ATTTCCACGG CAAGTTTGCC
GAATCAGCGC CCAGGCTCGA CAACGTTAGC AGTGGCGATC CGCACAAGGC GCAATTGCTC
AACCTGCTGC GCCTTGTCCA GGGCGATGCC GAAACGGCCG AAATTGCCGC GGCGATGAAA
CAGGACCCGA TGCTCAGCTT CCGCATTCTG CGCTACCTGA ATTCCCCGGC GCTGGGCCTG
ACCCGCCAGA TCGATTCGCT AGAACAGGCC CTGGTTATTC TCGGCCGCCA GCGCCTGAGT
CGCTGGGTAG CGGTACTACT CTTCTCTGTC CGCGATCCCC ATCTGGGCGA CTGGCTAATG
ATCGAAAATG CCCTGACCCG CGGCCGCCTG ATGGAAGTTC TTGGCGAACA GGTGATGCCC
GGGCAGCCGC ATGACCCGCT CTTCCTGACC GGCATCTTCT CCTGCCTTGA TCGTCTGTTG
CGCCGTCCGC TGGCTGAAAC GCTGAACGAC ATCCCCATTT CCACGGATAT CAGGCAGGCG
CTGCTTGAGC GTAGCGGCCC CTATGCCCCG CTGCTCGCCA TCGCCGAAGC GAGTGAGGAT
TTCGACCCGC CACGCATGGA AAGCACGGCC CGTTCCGCCG GCATTGACCC CGACAGCGTT
AACCGGGCCC TGCTGGCTGC CACCGCCTGG GCAAGCGAAG TGACCGAATA TTGGGAGTAG
 
Protein sequence
MFNGLKTLFG KKPDTPAPPE STGQPGRLAR DTPFLRREAV FDRSNRLSGH LFRLQQSTVL 
ANADDAEQRE LDQALLDTLN ASRDAWNTTL AFIPLSSSSL DLPAVERLKK ANIVLLIQLA
PEAEADMVCE AIDQLHVRGL QVGVFRQPKH RAFAKVIQRV DYAAIDIGGN EANAVRDFSA
AIRSGEREHP IRLFACNIDT FDDHLFCHQW HFENFHGKFA ESAPRLDNVS SGDPHKAQLL
NLLRLVQGDA ETAEIAAAMK QDPMLSFRIL RYLNSPALGL TRQIDSLEQA LVILGRQRLS
RWVAVLLFSV RDPHLGDWLM IENALTRGRL MEVLGEQVMP GQPHDPLFLT GIFSCLDRLL
RRPLAETLND IPISTDIRQA LLERSGPYAP LLAIAEASED FDPPRMESTA RSAGIDPDSV
NRALLAATAW ASEVTEYWE