Gene Daro_2891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2891 
Symbol 
ID3566296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3115077 
End bp3117653 
Gene Length2577 bp 
Protein Length858 aa 
Translation table11 
GC content56% 
IMG OID637681360 
Productresponse regulator receiver:ATP-binding region, ATPase-like:histidine kinase A, N-terminal 
Protein accessionYP_286091 
Protein GI71908504 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.432629 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGA AACCAGTATT GCTCCGAAGC AGCAAAAAAC AGCTTGCGAT CCCTGCGGTC 
TGGCTTGCTG CAACACTGGT TTTTTTCAGC CTGACCGTAT TGTTGGCATA CGACCTGTAC
CAGTCGTACC AGCGTGAATT CGCAAGTGTC CGGCGTGACT CCGGCAACCT GAGCGGCGTG
CTGGAAAGGC AGTTCACGGC AAGCGGTGAA AAAATCGACA TCGTCCTGCG TGAAGCGGTC
CATGAATACA CGCCCATCGT TACCGGCGCG GCCTCGCGTA GTGTTCTAAA CGCCAATCAG
GATCTGCTGC GACGCGAGGA AGTCGTTCCC GAAACCCAGG ACAAGAGCCT GCGGGTGATT
GACGCGAAGG GGCGCGTGAT CTTCAGCGCG TCTGATTCGG CAGACCTGCC CGAGATCAAC
GTTGGTGACC GCGCCTATTT TTTGAAACAG AAGAACGATC CTGCTGCCGG CTTGGTCATT
TCCGAACCGA TACTCTCCAG ATTCACAGGA AAATGGCTGT TCACCTTAAG TCGCCGGATT
GATCACCCGG ATGGACGATT TGCCGGCATC GTCCAAACCG CAATGCGTGC GGATTATTTT
CAGAACGCGT TCAAATCGAT TGACACCGGG GAACACGGTT CGATCGCCAT GTTCTCCTCG
GATTTCCGGC TGGTCGCCCG TTATCCGATC CTCGATGAAC TTCTGGGAAA GCCTTTCGAA
CTGACGGAAA TCCAGACGGG GCTCGACAAA GGGCAGCGTA TCGGTTCCTA TCAAGCGGTT
TCCCGTACGG ATGGTGTGAC TCGCCTTTAC AACTATCGTC AGCTTGAAAC TTTGCCCTTG
ATTATTGCCC TCGGCATGGC GCCGGAAGAT TTTCTCAAGG GCTGGAAACG GAAGGCGTGG
ATCTACTTCA TCAGTTGGCT GGCTTTCGGT GCCGCCCTGA GCATACTGAT TCGTCTGGCT
CAGCGGCGAT CCAGGGTGAT CGACAAGCTG AATGACCAAC TCGCAGAACA AGTCAGTCAG
GCCAAGGCGG CCAGTCAGGC AAAAAGCAAT TTCCTGGCTA ACATGAGCCA CGAAATCCGG
ACTCCGATGA ATGCCATCAT CGGTCTGACC CACATGCTCA GGCGCGACAA AGTGACACCG
GCCCAGGGCG AGAAACTGAT CCGCATTGCC GGAGCGGCCG ATCATCTGCT ATCGGTAATC
AACGACATTC TCGACCTGTC CAAGATCGAA GCGGGCAAGG TTGAACTTGA GGCAGAAAAC
TTTTCGCCGG AAGAAATGCT GCAACGAATC TGCAGCATCG TGCTGCTCCG GGCGCAGGCC
AAAGGCATCG AACTAGTCGT CGACGCGGGG GAATTACCGG CGCTGCTGAA TGGCGATGTC
ACCCGATTGG GACAGGCCTT GTTGAATTAT CTGAGCAACG CAGTGAAATT CACCGAGAAG
GGCAGCATCA TCTTGCGTGG CAACGTCCTC AAGGAAACCG AAAAGGATGT TCTTGTCCGC
TTCGAGGTAG AAGACTCGGG CATCGGCATC AGCCCTGAGA AACTTGCCCA CCTGTTTACC
GCTTTTGAAC AGGCAAGCGC TTCAATTTCG CGACACTATG GTGGCACTGG CCTCGGCCTG
GCCATTTCCA GGCACATTGC CATGCTGATG GGCGGTGAAG CCGGGGCCAG CAGCACCCCT
GGCAAAGGCA GCATCTTCTG GCTCACTGCC CGGCTGGGCA AAGCCCATCA AGAGGCTATT
CCGCTATCCA CCGAATTGGC TGGACGACGA GCCCTGGTTG CAGACGATCT GCAAATCACC
CAGATGGTCC ACTGCCACCT GCTCCGCCAA CTGGGATTGT CGCCGGAGGC GGTCGTTTCC
GGGCCAGCGG CAATTGCCGC CATCCAGAAG GCCGATGCCG AGAACGATCC GTTTTCCATC
CTGCTGCTTG ACCTGCTGAT GCCCGGCCAG GGTGGCATGG ATACGCTCGC CAAAATTCAG
AAGCTATCGC TGAATCGCCC CCCCATCTGC ATGCTGGTGA CTGCTTCGGG GGACAGCAGC
ATCGCCATTT CGGCGCGTGC CGCCGGATTT GCCGACGTCC TGGTCAAGCC GATCAATCAG
AGCATTTTGA AAGCCGCGCT AGCCCCCCAT TTCTCAATGT CGCCCCTGCC GGTCAGCCAA
AAAGAAGTGC TTCCCGAGCA GATATTGTCC CGGGAATACG CCGGCGCAAA AATCCTGCTC
GTCGAGGACG AACCGGTCAA TCAGGCCATT GCCAAGGAAT TTCTCCAGGG AGCAGGACTG
AATGTCACGC TAGCCAATAA CGGCAGGAAG GCGCTCGAAC TGGCGGAAAG CAGAGCATTT
GACCTCATCC TGATGGATAT GCAAATGCCG GTCATGGACG GCCTGCAGGC CACTCGCCAG
ATTCGTGCGC TTCCCGGTTA TTCGGAGGTC CCGATTATCG CCATGACCGC CAACGCCTTC
ACCGAAGACC GCACCAAATG CCTGCTTGCC GGCATGAACG ACTTTATCTG CAAGCCCGTG
GAGCCGGAGG TATTCTTTTC GATGTTGCTC AAATGGCTGA CATCCATAAA AGCCTGA
 
Protein sequence
MAEKPVLLRS SKKQLAIPAV WLAATLVFFS LTVLLAYDLY QSYQREFASV RRDSGNLSGV 
LERQFTASGE KIDIVLREAV HEYTPIVTGA ASRSVLNANQ DLLRREEVVP ETQDKSLRVI
DAKGRVIFSA SDSADLPEIN VGDRAYFLKQ KNDPAAGLVI SEPILSRFTG KWLFTLSRRI
DHPDGRFAGI VQTAMRADYF QNAFKSIDTG EHGSIAMFSS DFRLVARYPI LDELLGKPFE
LTEIQTGLDK GQRIGSYQAV SRTDGVTRLY NYRQLETLPL IIALGMAPED FLKGWKRKAW
IYFISWLAFG AALSILIRLA QRRSRVIDKL NDQLAEQVSQ AKAASQAKSN FLANMSHEIR
TPMNAIIGLT HMLRRDKVTP AQGEKLIRIA GAADHLLSVI NDILDLSKIE AGKVELEAEN
FSPEEMLQRI CSIVLLRAQA KGIELVVDAG ELPALLNGDV TRLGQALLNY LSNAVKFTEK
GSIILRGNVL KETEKDVLVR FEVEDSGIGI SPEKLAHLFT AFEQASASIS RHYGGTGLGL
AISRHIAMLM GGEAGASSTP GKGSIFWLTA RLGKAHQEAI PLSTELAGRR ALVADDLQIT
QMVHCHLLRQ LGLSPEAVVS GPAAIAAIQK ADAENDPFSI LLLDLLMPGQ GGMDTLAKIQ
KLSLNRPPIC MLVTASGDSS IAISARAAGF ADVLVKPINQ SILKAALAPH FSMSPLPVSQ
KEVLPEQILS REYAGAKILL VEDEPVNQAI AKEFLQGAGL NVTLANNGRK ALELAESRAF
DLILMDMQMP VMDGLQATRQ IRALPGYSEV PIIAMTANAF TEDRTKCLLA GMNDFICKPV
EPEVFFSMLL KWLTSIKA