| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2836 |
|---|
| Symbol | |
|---|
| ID | 3566476 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 3046516 |
|---|
| End bp | 3047763 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637681305 |
|---|
| Product | LolC/E family lipoprotein releasing system, transmembrane protein |
|---|
| Protein accession | YP_286036 |
|---|
| Protein GI | 71908449 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 0.620052 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTGC CTTACGAACT GTTGATCGGC CTGCGCTATA CGCGCGCCAA GCGACGCAAC
CACTTCATTT CATTCATCTC GCTGATCTCG ATGCTCGGCA TCGGCCTCGG CGTCGCCGCG
CTGATCGTCG TGCTGTCGGT GATGAACGGT TTCCAGAAGG AATTGCGGAC ACGCATTCTT
GGGGTGGCTT CGCACATCCA GATTACCGGC ATCAGCGGCG AATTGCCCAA CTGGCAGGCC
GTCGCCGAGC AGGCGATGAA GCATCCGGAA GTCAGGGCGA GCGCGCCTTT CGTGCAGTCG
CAGGGGATGT TTACCGTCGA TGGCACCGTC AAGGGGACGA TTGTCCGCGG CATCCTGCCT
GATCAGGAAG ATCGGGTCGC TGATTTCCGC AAGACCATCC AGAGTGGCAG CCTCGATGAT
CTGCGGCCGG GCGAGTTCGG GGTCGTACTT GGGGCCGATC TGGCCCGTTC GCTGCGCGTC
TTTACTGGCG ACAAGGTGAC GCTGATTGCG CCGCAGGGCA CAGTGACGCC GGCTGGCGTG
GTGCCGCGCC TGAAGTCGTT CAAGGTAGTC GGCATCTTCG AGGTCGGGAT GTACGAATAC
GACTCGGGGC TGGCGCTAAT CAATCTTGAA GATGCGCAGA AGCTCTACCA GATGGAAGAC
CGGGTCAGTG GTGTACGCCT GAAGGTCGAC GATCTCTTCC AGGCGCCGCG TATTGCCCGC
GAACTGGTTC GTTATATCGA TGCCGATGCC TATTTGAATG ACTGGACCAA GAGCCATGCC
AATTTCTTCC GTGCCGTGCA GATTGAAAAG AACATGATGT TCATCATCCT GTCACTGATC
GTCGCCGTTG CTGCCTTCAA CCTGGTGTCG ACGCTGGTCA TGGCGGTCAC CGACAAGCAG
GCCGACATCG CCATCCTGCG CACGCTGGGG GCGCGGCCAC TGTCGATCAT GGGAATTTTT
GTGATCCAGG GCGCGCTGGT CGGGTTCATC GGGCTGGGCC TGGGGATCGT TGGCGGCGTG
CTGCTGGCGC TCAATATCGA TGTCGTGGTG CCGTTCATTG AAAAAGTGCT CGGTGTGCAT
TTCCTGTCGA AAGAGGTCTA TTACATCTCC GACCTGCCCT CCGAACTGCA ATGGAGCGAT
GTCTGGGGTG TAACCCTGAT TGCCTTTGTG CTGGCCTTGC TGGCCACGCT GTACCCGAGC
TGGAAGGCAT CACGGGTCAA TCCCGCGGAG GCGCTGCGCT ATGAGTGA
|
|---|
| Protein sequence | MALPYELLIG LRYTRAKRRN HFISFISLIS MLGIGLGVAA LIVVLSVMNG FQKELRTRIL
GVASHIQITG ISGELPNWQA VAEQAMKHPE VRASAPFVQS QGMFTVDGTV KGTIVRGILP
DQEDRVADFR KTIQSGSLDD LRPGEFGVVL GADLARSLRV FTGDKVTLIA PQGTVTPAGV
VPRLKSFKVV GIFEVGMYEY DSGLALINLE DAQKLYQMED RVSGVRLKVD DLFQAPRIAR
ELVRYIDADA YLNDWTKSHA NFFRAVQIEK NMMFIILSLI VAVAAFNLVS TLVMAVTDKQ
ADIAILRTLG ARPLSIMGIF VIQGALVGFI GLGLGIVGGV LLALNIDVVV PFIEKVLGVH
FLSKEVYYIS DLPSELQWSD VWGVTLIAFV LALLATLYPS WKASRVNPAE ALRYE
|
|---|
| |