| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2827 |
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| Symbol | |
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| ID | 3566467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 3035302 |
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| End bp | 3037524 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637681296 |
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| Product | RelA/SpoT protein |
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| Protein accession | YP_286027 |
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| Protein GI | 71908440 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.00393712 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTTCCG TTGTCCATTC CGTCGCCGCC ACGAGCGACT TCGAACAGTT CCTCGTCACC
TTGACTGACG GGGTTCCTCC TGCTGATGCC GAGCGCCTGA AAAAGGCCGT TGAATACGCC
TGGGAAGTCT ATGGCGACCG GACGCTGGGT AGCGGTGAAC GCATCTGGTC GCACGCGCTG
GGCATGGCGG TCATCATTGC CGGACTCAAG CTTGATGTCG AGTCGCGCAT TGCCGCCGTG
CTCTTCGCCA TCCCGTCCCA TGACGAGCAT GGCATTACCA GTATCGAATC GCGTTTCGGC
AAGCCGGCTG CCCATCTGGT GCATGGCATT TCCCGACTCA ACAGGTTGCG GCCAATTACC
AAGGGTTTCG TTGCCATCAA CATCGAGGCT GGCGAGATCA ATCCGGCGGA GATGAAGGCG
CAGGTCGAAG TGTTGCGCAA GATGCTGCTC GCCATGGTCG AGGACATCCG TGTCGTGCTG
CTGCGTTTGG CCAGCCGGAC GCAGACCTTG CGCTTCTATG CGGCACATCC GGATGAACTG
CGGGTGCAGG TGGCACGCGA AACGCTGGAA CTGTATTCGC CGCTGGCCAA CCGGCTCGGG
GTCTGGGAAC TTAAGTGGGA ACTGGAGGAC TTGTCCTTCC GCTTCATCCA TCCGGATACC
TACAAGAAAA TTGCCAAGAT GCTGGACGAG AAGCGCAGCG AGCGCGAGAA GTTCATCGTC
GATGCGGTGG CGCGAGTCCG TGGCGAACTC GAAGCTGCCG GCGTCAAGGG GGCTGAAGTC
TATGGCCGTC CGAAGCATAT CTACAGCATC TGGAACAAGA TGCGGAAGAA GGACGTCGAG
TTTTCCGAGG TCTATGACGT TCGCGCTCTG CGCATCATCG TCGATGACCT GAAGGACTGC
TACACCGCGT TGGGTATCGT GCACAACCTG TGGCTGCCGA TTCCCAGGGA GTTCGATGAT
TACATCTCGA ACCCCAAGGG CAACTACTAC CGTTCGCTGC ATACGGCAGT GCGCTGCCCG
GATGGCCGCA GTCTGGAAAT CCAGATTCGT ACCGCCGAGA TGCACAAGCA TGCCGAACTC
GGCGTTGCCG CGCACTGGCG CTACAAGGAA GGCAGCAAAC GGACGACCGA GGATGACTAC
GACGAGAAGA TCGCCTGGTT GCGCCAACTG CTGACCTGGA AGGACGAAGT CGCCGACAGC
TCGGACTGGG TCAAGCATTA CAAGCAGGCG GCGCTCGACG AAACGATTTA CGTCATCACG
CCGCAGGGCA AGGTCGTCGA TTTGCCGGCC GGTTCGACAC CGATCGATTT CGCCTATCGC
GTCCATACCG ATCTTGGCCA TCGTTGCCGG GGCGCCAAGG TCGGCGGCCA ACTGGTGCCA
CTCAATACCT CGCTGGAAAC CGGGCAGGAA GTCGAGATCG TCACCGCCAA GGTGGGCGGG
CCGTCACGCG ACTGGCTGAA TCCCGGCCTC GGTTATATCC ACACCAAGAG CGCCCGGGTC
AAGGTGCGGG GCTGGTTCTC CAACCTGGCA CTGGAAGAAA CCTTGTCCGA GGGGCGCGGC
CTGATCGGCA AGGAATTGCA GCGGGCCGGG CAGACCGGGG CGAACATCGA GGAATTGTCC
CACAAGCTGG GCTTTGCCAA GGCCGATGAC CTGTATATTG CCGCCGCACG CGGCGACCTG
AACCAGCGGC AATTCCAGGC CGTGGCCAAG GGCGGCGACC TGCTGGCCGA AACGCAGTTG
CCCGATGAGG TGATCGCCAA ACCGAGCAAG CCGGTCGCCG GCAATCAGGG CATCCTGATC
GTCGGTGTCG ACAAGTTGCT GACCCAGTTG GCCCGTTGCT GCAAGCCGGC GCCGCCGGAC
GAGATCCAGG GGTTCATTAC CCGTGGCAAG GGGATTTCGA TCCACCGCAT GGATTGCCCC
AATTTTGCCA ATCTGGCCGC CCTGCATCCC GAGCGGGTCA TCGAGACGGA CTGGGGGCTG
CAGACCACCG GTGTTTTTGC CTGCGACATC ATTGTCGATG CACATGACCG CCAGGGTTTG
CTGCGCGATA TTTCCGAGAT ATTCACCCGG GAGAGGCTCA ATGTCGTCGG CGTCAACACC
CAGTCCAAGC AGGGCAAGGC GCACATGAGC TTTACCGTCG AAATTACCAA TCTGCAGCAA
TTGCAGCGCA CGCTGACGCT GGTCCACGAC GTCGAAGGTG TCGTCGGCGT GCGGCGTGCC
TGA
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| Protein sequence | MVSVVHSVAA TSDFEQFLVT LTDGVPPADA ERLKKAVEYA WEVYGDRTLG SGERIWSHAL
GMAVIIAGLK LDVESRIAAV LFAIPSHDEH GITSIESRFG KPAAHLVHGI SRLNRLRPIT
KGFVAINIEA GEINPAEMKA QVEVLRKMLL AMVEDIRVVL LRLASRTQTL RFYAAHPDEL
RVQVARETLE LYSPLANRLG VWELKWELED LSFRFIHPDT YKKIAKMLDE KRSEREKFIV
DAVARVRGEL EAAGVKGAEV YGRPKHIYSI WNKMRKKDVE FSEVYDVRAL RIIVDDLKDC
YTALGIVHNL WLPIPREFDD YISNPKGNYY RSLHTAVRCP DGRSLEIQIR TAEMHKHAEL
GVAAHWRYKE GSKRTTEDDY DEKIAWLRQL LTWKDEVADS SDWVKHYKQA ALDETIYVIT
PQGKVVDLPA GSTPIDFAYR VHTDLGHRCR GAKVGGQLVP LNTSLETGQE VEIVTAKVGG
PSRDWLNPGL GYIHTKSARV KVRGWFSNLA LEETLSEGRG LIGKELQRAG QTGANIEELS
HKLGFAKADD LYIAAARGDL NQRQFQAVAK GGDLLAETQL PDEVIAKPSK PVAGNQGILI
VGVDKLLTQL ARCCKPAPPD EIQGFITRGK GISIHRMDCP NFANLAALHP ERVIETDWGL
QTTGVFACDI IVDAHDRQGL LRDISEIFTR ERLNVVGVNT QSKQGKAHMS FTVEITNLQQ
LQRTLTLVHD VEGVVGVRRA
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