| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2809 |
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| Symbol | |
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| ID | 3566561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 3016248 |
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| End bp | 3017195 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637681278 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_286009 |
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| Protein GI | 71908422 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | [TIGR02019] bacteriochlorophyll 4-vinyl reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0000000226254 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCTATC GCCTTCCTCC GCTTGCCGCC TTGCGCGCCT TCGAGGCCGC CAGCCGCCAT
CTCAGCTTCA AGAAAGCGGC GGAAGAGTTG CACGTCACGC CGGCAGCCAT CAGCCAGCAG
ATCAAGGCAC TGGAGGAGTA CGTCGGATTC AGCTTGTTCC ATCGCCTGAC CCGGGCGCTT
TCGCTGACGG CACAGGCCGA GGCGATGTTG CCCAAATTGC GCGAGGGTTT TGAATGTCTG
GCCGCCGCAC TGGATACGAC TCGGCCGCCG GGTGAAGGGG TACTGACGGT CATCGCGCCA
CCTTCATTCG CGACGCGCTG GCTGGTTCCC CGCCTGCCCC GCTTCGCTGC CGAGCATCCG
GAAGTCAAAT TGCGCCTGTC CAGCCAGAAC GATGCAGTCG ACCGGCCTGG TGAGTCGAAG
ATAACCGATG AGCCACACGA TCTACGGACA GCCGATACTT CATTGGCAAT TCGCTACGGC
ACCGGTGATT ACCCCGGCTT TCACGTTCAG CAACTTTTTG CCCCGGCCTG GGTGCCGGTG
TGCTCACCCC GCCTGGCGAC TGCGGAGCGA CCACTGGATA CCCCGGATGA TCTGGCTCGC
CATGTCCTGA TTCACGATGA AACCATCCAT GACGATCCAC GCCCGCCCAA TTGGCTGGAG
TGGCTGACCC GGGCGGGTGT CGGCGGGTTT GATGCCGAGC GCGGACCGCG CTTTTCCAAC
GCGGTGCTGG CGGTCGAGGC GGCACTGGAT GGGCAGGGCG TCGCCTTGGC GCTACTGCCG
CTCGTCGAGG CCGATGTTGC GGCGGGACGA TTGATTATTC CCTTCAAGCT GAGCGTCCCC
TCGCCCTATG CCTATTTTCT GGTCATGCGA AAAGTGTTTG CCGGACGCCC TTCGGTCGCC
GCGTTTTGTG ACTGGTTGAT GGCCGAAGTC GGAACGACAA GCCGGTAG
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| Protein sequence | MSYRLPPLAA LRAFEAASRH LSFKKAAEEL HVTPAAISQQ IKALEEYVGF SLFHRLTRAL
SLTAQAEAML PKLREGFECL AAALDTTRPP GEGVLTVIAP PSFATRWLVP RLPRFAAEHP
EVKLRLSSQN DAVDRPGESK ITDEPHDLRT ADTSLAIRYG TGDYPGFHVQ QLFAPAWVPV
CSPRLATAER PLDTPDDLAR HVLIHDETIH DDPRPPNWLE WLTRAGVGGF DAERGPRFSN
AVLAVEAALD GQGVALALLP LVEADVAAGR LIIPFKLSVP SPYAYFLVMR KVFAGRPSVA
AFCDWLMAEV GTTSR
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