| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2617 |
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| Symbol | |
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| ID | 3567247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 2815528 |
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| End bp | 2818647 |
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| Gene Length | 3120 bp |
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| Protein Length | 1039 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637681081 |
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| Product | heavy metal efflux pump CzcA |
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| Protein accession | YP_285817 |
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| Protein GI | 71908230 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.659175 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.427313 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAAGT GGCTTCTCGA CAACAGCCTT GCCAACCGCC TGCTGGTCAT CATCGCCAGC
TTGGTGCTGA TGGCTTATGG GGCATTCACG CTCTCCCGCA CACCGGTGGA TGTGTTTCCG
GACCTCAACA AACCGACGGT CACCATCATG ACCGAGTCCG GCGGTATGGC CGCCGAGGAA
GTGGAGCAAC TGATCACCTT CCCGCTGGAA ACGACCATGA ACGGTCTGCC CGGTGTGGAA
AGCGTGCGCT CGGTGTCCAG TGCAGGCCTC TCTTTCATTT ATGTGACCTT CAACTGGAAA
ACAGAGATTT TTCGGGCCAG GCAGATGGTG TCTGAACGTC TTTCCTCGAT GGAGGAAGGT
TTGCCAGCGG GCGTCACGCC GCGCATGGGG CCAATCAGTT CGATCATGGG CGAAATCATG
CAGATCGCCA TTCCCATCGA CACCGCGAAG ATTTCGCCGA TGCAGGTGCG CGAATACGCC
GACTGGGTGC TGCGGCCGCG TCTGATGGCA ATTGCCGGTG TGGCGCAGGT CATTCCCATC
GGCGGCGAGG TGCGGCAGTT CCAGGTGCAG CCGAACACGA CCCGCATGGC GGAACTGGGC
ATCTCGCACG AGCAGTTGAC CGGGGCGCTC AAGGGCTACT CGGCCAACAC CTCCGGCGGC
TTCCTCGAAC TCAATGGCCG CGAATACCTG ATTCGCCATC TCGGCCGCAC GTCGCGTCTG
GACGACCTGA AGAACCTGGC GCTGACGGCC CGCCACGGTC AACCTGTTTT ATTGCGGCAA
ATCGCCGACG TGACCTTCGC ACCGGCCATC AAGCGGGGCG ATGCCGGTTT CGAGGGCAAA
CCGGCGGTCA TTCTCGGCAT CCAGAAGCAG CCGACGGCGG ACACAATCCA TCTGACCCGA
AGCATCGAGG CCGCAGTGGA GGATCTGAAG AAATCGCTGC CGGCGGGTAT GGAGGCGCCC
AAGGTGACCT TCCGCCAGGC CAGTTTCATC GAGTCGTCGA TCAGCACGCT GCAAGGCAAG
CTGATCGGGG CATCGGTCTT CGTCGCAGTC ATCCTGTTCT TCTTTCTGGG CACCTTGCGC
CCGACGGTGA TCGCCCTAAC CGCTATCCCG GTGTCGATTT TCATGACGGC GCTGGTCTTC
GACTATTTCG GCCTGTCGAT CAACACCATG ACGCTGGGTG GTCTGGCCAT CGCCATTGGC
GGCCTGGTCG ATGACGCCGT GGTCGGCGTC GAGAACGTGC TGCGACGGCT GAAGGAAGAC
CGGGCCAAGC ACCACGATCA CCGGATGCAT CCGATTGAGC TGGTCGCCCA TGCGACGATG
GAGGTGCGTT CGGCCATCCT CTACGCAACG ATCATCATCG TGCTGGTTTT TCTGCCGCTC
TTCGCGCTGC CCGGTATGGA AGGGCGCTTG TTCGTGCCGC TCGGCATCGC CTTCATCGTT
TCGACGTTGG CCTCGCTGGT GGTGTCGGTG ACAGTGACGC CGGTGCTCTC CTTCTATCTG
TTGCCACGCA TGAAGTCACT CGATCATGGC GATACGAAAC TGCTGGCCTG GCTGAAAGCC
AGCTATGGGC GCAGTTTGCA GACGGTACTC AACCGTCCCA AAGCGGCGTT GGCGGCCGGT
GCCGTCGCCA TTCTGGTGGC AGCAGTCGCG GTGCCGTTCT TCCCCAAGAC CTTCCTGCCG
CCCTTCAATG AAGGAACGCT GCTGATTGGC ATGCGCCTCA ACCCCGGCGT CACGCTGGCC
GAGTCGTCGG CCTTGGCGCA ACAGGCCGAG GTGCTGGTCA AAGCGGTGCC GGAAGTGGTG
CACGTCGGGC GACGCAGCGG CCGGGCTGAA CTCGACGAGC ATGCGGAAGG CGTCCATGTC
AGCGAACTGG ATGTCGGCCT GAAGCCAGCA TCCGAAATGA CGCGCTCAAT GGGCGAAATT
TCGGCCGACA TTCGCGCCCG CCTGATCAAC CTGCCGGCGG CGATTGCCAT CGGCCAGCCT
ATCTCGCACC GTATCGACCA CATGCTGTCC GGCGTGCGTT CGCAGATCGC CATCAAGATT
TTTGGCGACG ACCTCGACAC GCTACGCGGT CAGGCCGATG CGCTGCGCGG CAGGCTGGCC
GGTATTCCCG GTATCGCAGA TCTGGAAATC GAGAAGCAGG TGCTGGCGCC GCAGATCAAG
GTCAGCGTCA ATTATGCGAC GGCCGCGCAA TACGGCGTGC CGACGCCGCA GATTCTGGCG
ACGCTGCAAA GCCTGGTCGA AGGCGAAAAG GTAACCCAGG TCGTCGAGGG CGGCCGGCGC
TTCGCGCTGG TCGTGCGCTT GCCCGAATCA TCCCGCTCGT TGCAAGGACT GGGGCAGATT
TTGCTGGAGA CGCCGGGCGG CCCGATTCCC TTGTCAAAAA TTGCCACCAT CGAGGATGGC
GACGGGCCGA ATCAGGTCAG CCGCGATGAC GGCAAGCGGC GCATCGTGCT TTCAGCCAAC
GCGCAAGGAC GGGCGTTGTC CGAGATTGTC GAGGACATCC GCAAGGTCGT CGGCGACAGC
AAGCTGCCGG AAGGCTACTT CATCACCCTG GGCGGACAAT TTCAGGCGCA GGAAGAGGCT
TCGCGGCTGG TTGGCCTGCT CTCCATCGTC TCGCTGGTGC TGATGTTCGT GGTGCTGTTC
AGTCGCTACA AGTCGGTCGT GCTGTCGGCG CTGATTATGG CCAACATTCC GCTGGCGCTG
GTTGGCGCAG TGCTCGGCTT GTGGATTTCC GGGCAGCCGC TGTCGGTCGC CGCGCTGGTC
GGTTTCATTA CGCTGGCCGG CATTTCGGTG CGCAACGGGA TTCTAAAAGT CAGCCACTAC
ATCAACCTGA TGCGCATGGA AGGCGAGAAC TTCGACCACA AGATGATTCT GCGCGGCTCG
CTGGAACGTC TCGCACCGGT CTTGATGACG GCGCTGGTCA CCGCCTTCGC ACTGGCGCCG
TTGTTGTTCG AGGCCGAGCG GCCGGGCACG GAAATCCTGC ATCCGGTGGC GGTGGTCATC
TTCTCGGGCC TGATCAGCTC AACCCTGCTC GATACCTTCC TAACACCCGC CATGTTCTGG
CTGTTTGGCC GCAAGGATGT GGAACGTCTG ATGGCCGACC GCGATGCCGG TGCGCTTTGA
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| Protein sequence | MFKWLLDNSL ANRLLVIIAS LVLMAYGAFT LSRTPVDVFP DLNKPTVTIM TESGGMAAEE
VEQLITFPLE TTMNGLPGVE SVRSVSSAGL SFIYVTFNWK TEIFRARQMV SERLSSMEEG
LPAGVTPRMG PISSIMGEIM QIAIPIDTAK ISPMQVREYA DWVLRPRLMA IAGVAQVIPI
GGEVRQFQVQ PNTTRMAELG ISHEQLTGAL KGYSANTSGG FLELNGREYL IRHLGRTSRL
DDLKNLALTA RHGQPVLLRQ IADVTFAPAI KRGDAGFEGK PAVILGIQKQ PTADTIHLTR
SIEAAVEDLK KSLPAGMEAP KVTFRQASFI ESSISTLQGK LIGASVFVAV ILFFFLGTLR
PTVIALTAIP VSIFMTALVF DYFGLSINTM TLGGLAIAIG GLVDDAVVGV ENVLRRLKED
RAKHHDHRMH PIELVAHATM EVRSAILYAT IIIVLVFLPL FALPGMEGRL FVPLGIAFIV
STLASLVVSV TVTPVLSFYL LPRMKSLDHG DTKLLAWLKA SYGRSLQTVL NRPKAALAAG
AVAILVAAVA VPFFPKTFLP PFNEGTLLIG MRLNPGVTLA ESSALAQQAE VLVKAVPEVV
HVGRRSGRAE LDEHAEGVHV SELDVGLKPA SEMTRSMGEI SADIRARLIN LPAAIAIGQP
ISHRIDHMLS GVRSQIAIKI FGDDLDTLRG QADALRGRLA GIPGIADLEI EKQVLAPQIK
VSVNYATAAQ YGVPTPQILA TLQSLVEGEK VTQVVEGGRR FALVVRLPES SRSLQGLGQI
LLETPGGPIP LSKIATIEDG DGPNQVSRDD GKRRIVLSAN AQGRALSEIV EDIRKVVGDS
KLPEGYFITL GGQFQAQEEA SRLVGLLSIV SLVLMFVVLF SRYKSVVLSA LIMANIPLAL
VGAVLGLWIS GQPLSVAALV GFITLAGISV RNGILKVSHY INLMRMEGEN FDHKMILRGS
LERLAPVLMT ALVTAFALAP LLFEAERPGT EILHPVAVVI FSGLISSTLL DTFLTPAMFW
LFGRKDVERL MADRDAGAL
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