Gene Daro_2546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2546 
Symbol 
ID3567522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2740380 
End bp2745389 
Gene Length5010 bp 
Protein Length1669 aa 
Translation table11 
GC content64% 
IMG OID637681013 
Producthelicase, C-terminal 
Protein accessionYP_285749 
Protein GI71908162 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG4646] DNA methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.26749 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGTC GTTCCACTGC GCCTTCCATG TGGCTGCCCG GATTCGATCC GGACGAGCCC 
GAGCCCCCTA CCCTGCCGAA ACTGGCAATC CCCATCGTCA TTCCGACGGT GGACGCGGCC
TTGGCGGAAT GCATCGAAGC GACTCAGATC GAGACGCCCG AACCTGCCAT AGTTGCCCGC
GCCAGTTGGC GCACGACCAG CCAGGTCGTC GAGGCCGCAC CACGCATCCT GTGGCCGCGC
CTCACCAGTG CCGGCCGGCT CTATCCGGTC GGCGCCGTCG CCAAGTTCGA GGCCAATCTG
GTGGCCATCG ACACCCTGCA ACGGATGGAG AACGAGAACC GCATACCCAG TGCGGAAGAG
CGCCAGGCCC TCCTGCGCTA CACCGGCTGG GGCGGTCTGC CGGCGAGTTT CAACCTGGAT
ACGGACGAGC CCGCTTGGGC CGAACGCGCC CGACGGTTGC AGGACCTGCT GCCAGCCGAG
GATTACGCCT CTGGGCGGGC CTCCGTGAAC AACAGCCACT ACACCGAGAT TCACGTGATC
GAGGCCATGT GGCAGGCAAT ACATCGATTC GGCTTCAGCG GCGGCCGCGT GCTCGAACCC
GCTGCCGGCA TCGGCCATTT CATCGGCACC ATGCCGGAGG ATTTGGCCGG GTGCAGCACC
GTCACCGCCA TCGAGATCGA CCGCCTTTCG GGTCGCATCC TCCAGGCGCT CTATGCCTCC
GGCGGCGCGG ACGTGCGGAT CGCTCCCTTC GAGAAAACGC CGCTGCCCGA GAACTGGTTT
GATCTGGTGA TCGGCAACGT TCCTTTCGGC AAGTACCAGG TCGCCGACCA GAGCAACCGG
GCCTATGCCC ACTACAACAT CCACAACTAT TTTCTCGGGC GCGCTATCGA CCTGGTACGC
CCCGGTGGGC TGGTCTGCCT AATCACCAGC AGCCACACGA TGGAGTCCCG GCAAGAGACG
GTACGCCAGT ATCTCGCCAG CCAGGCCCAT CTGCTGGGGG CCATCCGGTT ACCGAAAGGT
GCCTTCGCCG GCATCGCCGC CACCGAGGTG CAGACCGACA TCCTGTTCCT GCGCAAGCGG
CAACGCTCGG AGACGGTCGA AGCCGAGTGG CTGGACATCA CCGCGGTGCC GAACGAATTG
AGGCACCCTT TGGCACCGCC GAATCGCTAC CTGCCGATCA ACGAATGGTA CATGCGGCAC
CCCGAGTTCT GCATCGGTCG CATCCGTAGC GAGAGCAACG GCTACGAGGA AGTCCCGATG
GCAGTTTTCG AGGGCGACCT GGAAGCGGCC CTGCGCGAGC GCATCGCCTT GCTGCCCACC
GGCGTCTTCG AGCCGGTTAA GCACGCAACG GCACCGCTAC GTGTCGTGGT GCCGGCCGAA
GCCGGTGCCC GTCCCGGTAG CTTCCGTCTG CATCAAGGGC GGGTGCATCG GGTCGAAGGC
GGCGAACTGG TCGATGTCCA TGACCAACTC AATGCCACGC AGCGGGGCCA GATCACCGGC
ATGTGCGCGA TCCGCGACCA TGCCCGGACC CTGCTCGATG CGCAACTGGA GGACGAGAAC
AATGGTCGTC TGGGTCACCA GCGGGCCATG CTCAACGGCA CCTACGACCG CTTCGTCGCC
AAGTACGGCT GCCTGACGGC CCGGGCCAAC GCGCTGGCAT TTCGGCGCGA CCCGGACTAT
CCGCTGCTGC TGTCCCTGGA GCACTACGAT GAGGAATCGG GCACGGCGCG CAAGGCGGCG
CTGTTCTCCC AGCGCACATT GAGCCGCGTA GTCGAACCCG ATCGTGCAGG CGAACCGAGC
GAGGCACTGG CCGCCTCGGT GCAGTGGCGA GGCCGGGTCG ATCCGGCCTA CATGGCCGGG
CTGCTGGAAG CACCGGAAGC CGAAGTCATG GCTATGCTTG CCAGCGCCGG CCACATTTTC
CTGGACCCGA TGGATGGGGA CTGGAAGACC GCCGACGACT ACCTGTCGGG CAACGTGAAA
ACGAAGCTCA AACAGGCGGC GCTGTCGGGA CCGGCGTATC GGCGCAATGT CGAGGCGCTG
GAACGGGTAC AGCCCGAGGA TCTGCCGCCG GCGGCCATCG AGCCGCGCCT GGGCGCGGTG
TGGGTTCCGG CCCATGACGT CGAGACTTTC GTCCAGGAAG TGCTGGAACT GAAGGACTGC
CAAGTGGGCT ACTCGGCCGA GGCTGGTGCC TGGTCGGTGA AGTACGGCGA GTGGGAAGCC
CGGCAGAACG TCAAGGTAAC CCAGGAATTC GGCACCTCGC GCATGAACGC CATCGAACTG
GTGCAGTGCG CGCTGAACGT CCAGGTGCCT ACGGTGCGCG ACCGCGACCC GGAGACCGAC
AAGTACTACG TCAATGCCGA CGAAACCTTG GCCGCCCGGG AAAAACTGGG CCTGGTCAAA
GAACGTTTTG CAACCTGGGC CTTTTCGGAG ACTGAACGCC GCGAGCGCTT GTGCCGCATC
TACAACGATC TGTTCAATGC GACGCGGCCG CGCCACTTCG AAGGTTCGCA CCTGAAGTTG
CCGGGTTTCT CCCGCTGCTT CGATCTGCAT CCGCACCAAC CGGATGCCGT TTGGCGCATC
GTGCAGTCCG GAAATACCGG CCTCTTTCAC GTGGTCGGTG CCGGCAAGAC GGCGGTCTGC
GTCATTGCCA GCATGGAACT GCGCCGTCTG GGGTTCGCCA ACAAGCCTTG CCATGTGGTG
CCCAATCACA TGCTGGCCCA ATACACCGCG GAGTTCGTCC GGCTCTACCC GAACGCCTCG
GTGTTGATGG CAAGCAAGGA AGACCTGGAG GGCGATCGCC GGCGCGAGTT GGTGTCACGC
ATCGCCACGG GCGATTGGGA TGCGGTAGTC ATAACCCACT CGAGCTTCGA GCGCATCAAG
TTGTCGCCGC AATTCACCGA GGGCTACATC AAGGAGATCA TCCATGAAAT AGAAATGGCG
GTACGCGCCG AGAAGAGCAA CGACCGGTCG AACCGGATCG TCAAGCAACT CGAGGCGATG
AAGAAAAGCT GGCAGGTCCG GCTGGAAAAG CTGTCCGCCG ACAGCAAGAA GGACGATCTG
CTGACCTGGG AGCGACTGGG CATCGACTGG CTGTTCGTCG ATGAAGCCCA CTTGCACAAG
AACCTCTACC GGTTCACCAA GATGACCCGG GTGGCAGGCC TGCCGCTGAC CAGTTCGGAG
CGCGCCTTCG ACCTCTTCCT GAAGACGCGC TACACCATGC AGCGCCACGG CAATGCGCAG
CGCGGCGTGG TGTTCGCGAC GGCAACACCG GTGGCCAACA CCATGGCCGA AGTCCACACG
ATGATGCGCT ACCTGCAGCC CAAGCGGCTG GAGGAACTTG GGCTACAACA GTTCGATGCC
TGGGCGGCGA CCTTCGGGGA GAGCGTGACG GCGCTGGAAA TCGCGCCGGA CGGCAGCGGC
TATCGCATGC ACACGCGCTT CGCCCGGTTC ATCAACGTGC CCGAGCTGAT GGCGGTGTTC
GGCGAAGTGG CCGACATCCG CACGGCGGAG ATGCTGGCCC TGCCGGTGCC AAAGTTGCGT
GGCGGCAAGC CGCGAGTCGT CGCCTGCCCG GCCAGCCCGT CGTTGAAGGC CTTCGTGCAG
ACCCTGGTGT TGCGCGCCGA GGCGATCCGC AACGGCGAGG TCGATCCGAA GGACGACAAC
ATGCTGGCGG TGACCACCGA CGGCCGCAAG GCCGCGCTGG ACTTCCGGCT GGTGGCACCG
ACGGCCCGCT TCGACGATAA CGGCAAGGTG GCTGCCTGCG TGCGGGAAGT GCATGCCATC
TGGCAGCGCA CGATGGATTT CCGCGGTGCG CAGTTGGTAT TCTGCGACTT GTCGTCCCCC
AAGGGCGGCA AGACGTTCAG CGTCTACGAC GACTTGCGGG CGCGGCTCAT GGCAGCGGGC
ATTCCCGAGA AGGAAATCGC CTTCGTCCAT GACGCCGAGA GCGATGCTCA GAAGGCTGCG
CTGTTCAAGG CGGTCCGGGA AGGCCGGGTG CGGGTGCTGT TGGGCTCCAC CGCCAAGATG
GGGGTGGGCA CCAACGTGCA GACGCGCCTC GTGGCCCTGC ATCACCTGGA TGCCCCGTGG
CGTCCCTGCG ATGTTGAGCA ACGCGAGGGC CGCATCCTGC GCCAGGGCAA TCTGAGCGAG
GAAGTGGAAA TCTTCCGCTA CGTCACCCAG CAAAGCTTCG ACAGCTACTC ATGGCAGACG
CTGGAAACCA AGGCACGCTT CATCGCTCAA GTCATGGCCG GCGACAAGGG AATCCGTTCG
CTGGAAGATG TAGAACTGGC GGCCCTGTCC TACGCCGAGG TGAAAGCCTT GGCCTCGGGC
AATCCATTGG TGATCGAGAA AGCCGGTGTA GACGCGGAGG TAGCCAAGTT CTCGACGCTG
TTCTCGGTGT GGCGCAACCA GCGCTTTGCC AATGAGGGCG AGGTGAGCCG GTTGCCGATT
ATGATCGAGG CGCTGGAAAA CAAGATCGCG CTCTATGCAC AGGATTTGGA ACGAGTTGAA
ACCCCAACCT TCCAGGGCCT CGCCCTGGAA CTCGGCCGCC GGCGGATTGT CGGCGCCGAT
GCCGTGGGCG AGGCGCTGCG CGGCCTGGTG AAGTCCGCGA AGGACGAAGT GCAGACGGCA
AACCGCCCGA TCGAACGCGT CGTCGGCCGC TTCGGCGGCT TCGATCTCGG TGTGCGAGCC
ACCCGGAGCG GTGAAGTGCC CAATCTCTAC TTGTCCGGGC ACTGCCTGTA CCAGGCCGAT
CCCTATCAAA CGGGTCCGGC TCTCGTCGCC GCCCTGCTTG GTGCTTTGGA ATCGATAGCC
AAGCACCACA CCGATGCCGG GACACTGTTG GCAACCCGGC AAAAGAGGCT GGAGGATCTT
CGGTTGGAAC TGACCCGCCC CTTCGAGTAT GAAGGCCGCC TGACCGATCT ATTGATTCGG
CAGCGCGAAC TGCTCAGGCA ACTCGACCTG GACAAAGATG AGGCGGGCAT CGGGAAAATC
GACACCGAAG ATCTGCGGCA AACTGCTTGA
 
Protein sequence
MARRSTAPSM WLPGFDPDEP EPPTLPKLAI PIVIPTVDAA LAECIEATQI ETPEPAIVAR 
ASWRTTSQVV EAAPRILWPR LTSAGRLYPV GAVAKFEANL VAIDTLQRME NENRIPSAEE
RQALLRYTGW GGLPASFNLD TDEPAWAERA RRLQDLLPAE DYASGRASVN NSHYTEIHVI
EAMWQAIHRF GFSGGRVLEP AAGIGHFIGT MPEDLAGCST VTAIEIDRLS GRILQALYAS
GGADVRIAPF EKTPLPENWF DLVIGNVPFG KYQVADQSNR AYAHYNIHNY FLGRAIDLVR
PGGLVCLITS SHTMESRQET VRQYLASQAH LLGAIRLPKG AFAGIAATEV QTDILFLRKR
QRSETVEAEW LDITAVPNEL RHPLAPPNRY LPINEWYMRH PEFCIGRIRS ESNGYEEVPM
AVFEGDLEAA LRERIALLPT GVFEPVKHAT APLRVVVPAE AGARPGSFRL HQGRVHRVEG
GELVDVHDQL NATQRGQITG MCAIRDHART LLDAQLEDEN NGRLGHQRAM LNGTYDRFVA
KYGCLTARAN ALAFRRDPDY PLLLSLEHYD EESGTARKAA LFSQRTLSRV VEPDRAGEPS
EALAASVQWR GRVDPAYMAG LLEAPEAEVM AMLASAGHIF LDPMDGDWKT ADDYLSGNVK
TKLKQAALSG PAYRRNVEAL ERVQPEDLPP AAIEPRLGAV WVPAHDVETF VQEVLELKDC
QVGYSAEAGA WSVKYGEWEA RQNVKVTQEF GTSRMNAIEL VQCALNVQVP TVRDRDPETD
KYYVNADETL AAREKLGLVK ERFATWAFSE TERRERLCRI YNDLFNATRP RHFEGSHLKL
PGFSRCFDLH PHQPDAVWRI VQSGNTGLFH VVGAGKTAVC VIASMELRRL GFANKPCHVV
PNHMLAQYTA EFVRLYPNAS VLMASKEDLE GDRRRELVSR IATGDWDAVV ITHSSFERIK
LSPQFTEGYI KEIIHEIEMA VRAEKSNDRS NRIVKQLEAM KKSWQVRLEK LSADSKKDDL
LTWERLGIDW LFVDEAHLHK NLYRFTKMTR VAGLPLTSSE RAFDLFLKTR YTMQRHGNAQ
RGVVFATATP VANTMAEVHT MMRYLQPKRL EELGLQQFDA WAATFGESVT ALEIAPDGSG
YRMHTRFARF INVPELMAVF GEVADIRTAE MLALPVPKLR GGKPRVVACP ASPSLKAFVQ
TLVLRAEAIR NGEVDPKDDN MLAVTTDGRK AALDFRLVAP TARFDDNGKV AACVREVHAI
WQRTMDFRGA QLVFCDLSSP KGGKTFSVYD DLRARLMAAG IPEKEIAFVH DAESDAQKAA
LFKAVREGRV RVLLGSTAKM GVGTNVQTRL VALHHLDAPW RPCDVEQREG RILRQGNLSE
EVEIFRYVTQ QSFDSYSWQT LETKARFIAQ VMAGDKGIRS LEDVELAALS YAEVKALASG
NPLVIEKAGV DAEVAKFSTL FSVWRNQRFA NEGEVSRLPI MIEALENKIA LYAQDLERVE
TPTFQGLALE LGRRRIVGAD AVGEALRGLV KSAKDEVQTA NRPIERVVGR FGGFDLGVRA
TRSGEVPNLY LSGHCLYQAD PYQTGPALVA ALLGALESIA KHHTDAGTLL ATRQKRLEDL
RLELTRPFEY EGRLTDLLIR QRELLRQLDL DKDEAGIGKI DTEDLRQTA