Gene Daro_2513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2513 
Symbol 
ID3567931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2710179 
End bp2710697 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content55% 
IMG OID637680979 
ProductBRO, N-terminal 
Protein accessionYP_285716 
Protein GI71908129 
COG category[K] Transcription 
COG ID[COG3617] Prophage antirepressor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value0.0512852 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.446294 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACCTG AAGACATCCA TGAGGCACAG GGTATGCGCA CTGCGCAGGG TATTCCTTCA 
CCTAAGCTCT ACCAGTTCGA TAACGTAGCA ACCGGGGACA GCTTCGCACT GTCCGCCCTG
GATAAGGATG GGCAAGCGTG GTTCATTGCT GCCGATGTAT GCAAAGCTCT GGGCCTTGAC
CGTACCGCAA CCAGCCGCCT TGATGAAGAT GAAAAGGGTG TGTGCAGTAC GCACACCCTT
GGAGGAATCC AGCAGGTTGC CATCATTAGT GAATCCGGCC TGTACTCGCT CATCTTCAGA
AGCCGAAAGG AATTAGCCAA GCGGTTCAAG AAGTGGGTTA CTTCCGTGGT CATCCCGTCC
ATACGCAAGC ATGGCGGATA TATCAACGGT CAGGAGGCAC TGAGCCAGCC AGCCCAAGAA
GTCGCCATCC AGGCCATCCA GGATCAAGCC CAGCGTGTCA GAGCCCAGCA CTACGAGGAG
AAGAACGACC GTAGAGAGGC CTTGAGGTTC ATCCGATGA
 
Protein sequence
MKPEDIHEAQ GMRTAQGIPS PKLYQFDNVA TGDSFALSAL DKDGQAWFIA ADVCKALGLD 
RTATSRLDED EKGVCSTHTL GGIQQVAIIS ESGLYSLIFR SRKELAKRFK KWVTSVVIPS
IRKHGGYING QEALSQPAQE VAIQAIQDQA QRVRAQHYEE KNDRREALRF IR