| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2450 |
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| Symbol | |
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| ID | 3568223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 2650463 |
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| End bp | 2651362 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637680918 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_285655 |
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| Protein GI | 71908068 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 0.226071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.847147 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTTA AAAGGGCCTG GAAACAGGTC GATGGCGTTC TCTTGCTCGA CAAGCCGCTA
GGGATGACCT CCAACGATGC TCTGCAAAAG GCACGTCGCC TCTTTTCGGC GGCAAAGGGC
GGCCATACAG GGACACTGGA CCCCCTGGCT ACTGGCCTGC TCCCATTGTG TTTCGGCGAG
GCGACCAAGT TTTCGGCCGA TTTGCTTGAT GCCGACAAGA CCTATGAGGC CGTTCTCAAG
CTTGGTGTTA CGACTGATTC AGGGGATGCA GAGGGGCAGG TGACGTCGAC TGCGATGGTC
GATATCCAAA AGGAGCAGGT TTCTGAAGTC TTGCCCAGAT TCGTTGGCGA CATCCAGCAG
ATTCCGCCCA TGCATTCGGC CTTGAAACGC AATGGTCGGC CACTCTATGA ATTGGCTCGC
CAGGGGATCG AAGTCGAACG CGAGCCGAGG GCGGTTACTA TTTTTGCCAT CGATTGCCTC
GATTTTTCCG GTGATTTGCT GACGTTGCGC GTTGCTTGCA GCAAGGGAAC CTATATTCGT
GTGCTGGCCG CTGATATCGG CAAGGCATTG GGTTGCGGTG CGCATCTGGC AGCGCTCCGC
CGAATCGTGG TGGGCGATAT ACGCCTGGGC AACTCCGTCA CACTGGCTGA GTTGGAAACC
TTGGACGAGG CAGGCCGTAT GGAGAGGCTC CTGCCGGTTG ATGCCTTGCT GCAGTCTTTG
CCCATCGTCG GCGTCGAGGG GCCGGAAGCG GAACGCTTCC GCCATGGCAA TCCGGTGAGC
TTGCCGGCCG GGTTGGCCGG TAAAGCTCGG GTCTATGCCG AGGGGCGATT GATTGGTGTC
GGTGAGCCGG GTCATGGTGG TTTGCTTTGG CCGAAAAGGC TGGTTCAACT GGCTGATTAA
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| Protein sequence | MQFKRAWKQV DGVLLLDKPL GMTSNDALQK ARRLFSAAKG GHTGTLDPLA TGLLPLCFGE
ATKFSADLLD ADKTYEAVLK LGVTTDSGDA EGQVTSTAMV DIQKEQVSEV LPRFVGDIQQ
IPPMHSALKR NGRPLYELAR QGIEVEREPR AVTIFAIDCL DFSGDLLTLR VACSKGTYIR
VLAADIGKAL GCGAHLAALR RIVVGDIRLG NSVTLAELET LDEAGRMERL LPVDALLQSL
PIVGVEGPEA ERFRHGNPVS LPAGLAGKAR VYAEGRLIGV GEPGHGGLLW PKRLVQLAD
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