Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_2414 |
Symbol | |
ID | 3568070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 2605990 |
End bp | 2607468 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637680881 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_285620 |
Protein GI | 71908033 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 0.217364 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGCG TTCGCCGAGC TCTTGCTATC TCGTTTATCG AACGTTACGC GCTGATCGCA ATATCGCTCG CCAGTAATAT TTTAATCGCC CGTCTTCTCT CACCAGAAGA AATTGGCCTT TACTCCGTCA GCTTAGCTGT CATCGGTATC GCTCAAGTCC TTCGTGATTT TGGGGTTGGC GGCTACCTCA TTCAAGAAAA AAACCTCACT GAAGCACACA TTCGCACTGC ATTTGGCGTA GCACTCATCA TGGGGCTATT GCTTTTCATA ATTACTCTCG CTGGCGCTTC GCTTGCAGTC AGAGTTTATG CAGAACCTCG AATGCTATTA ACACTACAAA TCTGCTCGAT CAATTTTCTC ATATTACCGT TCTGTACAGT TTCTCTGGCG ATGCTTCGCC GAGAGATGCT ATTCCAAAAA ATTCTATACG TTACCCTGTC TGCAACAATC CTAGGATTCA TAGCAACAAT TGCACTTGCA TATCTTGAAT TTGGTGCAAA TAGCATGGCG ATCGGCACCG TCACTACAAA TATATGCAGT GGATTCGGAG CTTGGATAGT TCGAAAAGAG CGTGTGATAT TGCTCCCCGC GCTGCACGAA TGGCGATCAG TTGTAGGATT TGGAAGTAAG CGATCTGCTG CTAGCATTGC AGTAACAATA TCCTCAGATA TCACTGAATT AGTTGCAGGA AAGCTTTTAG GATTTGGTCC CGTAGCTATC CTCAGCCGAG CCCAAGGTTT GATGAATCTA TTCCAGCGCG ACTTGATGGC CGCCGTTCAT GGAGTAGCCT ATCCCGCATT TGCAAATGCC CACCGTCAAA ACCAAGACTT GGAAACCCAC CACATAAATT CCATAGCGAT AATATCCGTC TTCGCATGGC CATTCTATGG ATTTGTCTCA ATATTCTCTC TTGAAATACT CAACTTACTA TTTGGTCCCC AATGGGATTC CGCCGCCGGT TTTGTCGGAT GGTATTGCCT AGCAGGCGCA GTTTTAACCC CAAGCTACTT GATTATTTCA TTACTAACAG CAACGGGAAA CATTACAACG GCGACGAAAA TTGAATTAAT AACCCACCCG TTACGGGCGT CGTTCTTTGT CATTGGCTTA ATCATCTTTC CCCATATTGA GACACCTCCC ATACTTTTTG TAATCGCTGC TGCATTTTCC TCCCCTTATG CTTTTTTCAT GAAGAATAAA GTACTTCCAA ACAATTGGCG CTTATTAACC AAAAATCTAA CAAAAAGTCT GATTGTAACT GCATTTAGCT TGACCCCAAC TTTAATTTTT GCAAATTACG AATTTGAAAT ATTGACAATT ACTTTTCCAA AACTCCTACT TGCATCCATT GCAGCGGCAA CGGGATGGTA CATTAGCCTG CACATAATTA AGCACCAATT AATTAACGAA ACCATATTCT TATCAATCAG CAAAAGAACG CTCGGCATTT TTAAAAAAAA ATCACATAAA ACGCAATAA
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Protein sequence | MTSVRRALAI SFIERYALIA ISLASNILIA RLLSPEEIGL YSVSLAVIGI AQVLRDFGVG GYLIQEKNLT EAHIRTAFGV ALIMGLLLFI ITLAGASLAV RVYAEPRMLL TLQICSINFL ILPFCTVSLA MLRREMLFQK ILYVTLSATI LGFIATIALA YLEFGANSMA IGTVTTNICS GFGAWIVRKE RVILLPALHE WRSVVGFGSK RSAASIAVTI SSDITELVAG KLLGFGPVAI LSRAQGLMNL FQRDLMAAVH GVAYPAFANA HRQNQDLETH HINSIAIISV FAWPFYGFVS IFSLEILNLL FGPQWDSAAG FVGWYCLAGA VLTPSYLIIS LLTATGNITT ATKIELITHP LRASFFVIGL IIFPHIETPP ILFVIAAAFS SPYAFFMKNK VLPNNWRLLT KNLTKSLIVT AFSLTPTLIF ANYEFEILTI TFPKLLLASI AAATGWYISL HIIKHQLINE TIFLSISKRT LGIFKKKSHK TQ
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