Gene Daro_2391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2391 
Symbol 
ID3567575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2576964 
End bp2577725 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content52% 
IMG OID637680858 
ProductABC transporter related 
Protein accessionYP_285597 
Protein GI71908010 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.692969 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCG TTCGTATTGA ACATGTTTAC AAGGACTATC AGCTTGGCGA TCAAACCGTT 
CAAGCCCTGC ATGATATTAC ATGGTCAATT GACGCCGGAG TATTCCTGGC GATCTCCGGA
CCATCGGGGA GCGGCAAAAC GACCCTGCTC AACCTGATCG GTTGCATCGA CAAACCGACC
AGCGGAAAAA TCTTCATCAA CGAAGAAGAC GTCTCCGAAA AATCGGCCAA CGAACTGGCT
GACATCCGCT CCCATTCCAT TGGATTTATT TTCCAGACCT TCAATCTGTT GCCAGTACTT
TCTGCGGCAG AAAATGTCGA ATACCCGCTT CTCAGACGTT CAGACATCTC AGCAGAGGAG
CGCAAAAAGC GGGTTGCCTA CTTCCTGGAT ATCGTCGGCC TGACCAAATT TGCCGACCAT
CGCCCAAACC AACTAAGCGG CGGCCAAAGG CAGCGGGTCG CTATCGCTCG CGCCCTGGCC
ATCAAGCCAA GCATCATTCT TGCCGATGAA CCGACCGCCA ACTTGGACAA GGCAACAGGC
CGCGAGATTC TGCGGCTCAT GAAACAGATC AATCGCCACC TGAAAACTAC CTTTATTTTC
TCGACCCACG ACCAAAAAGT CATCGACCAT GCTGACCGCC TGGTTCAGGT CGAAGATGGT
TACATCACTG CCTTTGGCAT ACGCACTCAA GGCGAAAAAA CCTGGAATAT TGCCCGCGTT
CGCCCCATGC CGGACGCCGA TGACGAAGCT GACTCCGACT AA
 
Protein sequence
MSVVRIEHVY KDYQLGDQTV QALHDITWSI DAGVFLAISG PSGSGKTTLL NLIGCIDKPT 
SGKIFINEED VSEKSANELA DIRSHSIGFI FQTFNLLPVL SAAENVEYPL LRRSDISAEE
RKKRVAYFLD IVGLTKFADH RPNQLSGGQR QRVAIARALA IKPSIILADE PTANLDKATG
REILRLMKQI NRHLKTTFIF STHDQKVIDH ADRLVQVEDG YITAFGIRTQ GEKTWNIARV
RPMPDADDEA DSD