Gene Daro_2387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2387 
Symbol 
ID3568601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2572908 
End bp2574152 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content56% 
IMG OID637680854 
Productaminotransferase AlaT 
Protein accessionYP_285593 
Protein GI71908006 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACG TCAAGAAATC CGCCAAACTC GCCAACGTCT GCTACGACAT TCGCGGCCCC 
GTGCTGCAAA AAGCCAAGCA GATGGAGGAA GAGGGTCACA AGATCATCAA GCTGAACATC
GGCAACCTGG CCGCGTTCGG TTTTGATTCG CCCGAGGAAA TCCAGCAGGA CATGATCCGC
AACCTGCCGA ATGCGGCTGG TTATACGGAT TCCAAGGGTA TTTTCGCGGC GCGTAAGGCG
ATCATGCATT ACACCCAACA GAAGGGCATC AAGGGCGTGA CGCTGGAGGA TATCTACGTC
GGTAACGGCG TGTCCGAACT GATCGTCATG GCCATGAACG CCTTGCTCGA TGCCGGTGAC
GAAGTGCTGG TCCCGGCGCC GGATTACCCG CTATGGACGG CAGCGATCAG CCTGTCCGGC
GGAACGCCAA AGCATTACCT GTGCGACGAG AGCAAGGGCT GGCTGCCAGA TCTCGACGAT
ATCCGCAGCA AGATCAACGC CCACACCAAG GCGATCGTGC TGATCAACCC GAATAATCCG
ACCGGCGCCC TTTACCCGGA TGATCTGCTG TACGAGATCA TTGACATCGC CCGTCAGCAT
CACCTGACTA TCTACGCCGA CGAGGTGTAC GACAAGGTGC TCTACGACGA TGTGAAGCAC
ACGTCGATTG CCTCGCTGGC CGAGGATGTG CTGATGATCA CGTTCAATGG TCTGTCGAAG
AACTATCGTT CTTGCGGTTA TCGTGCCGGC TGGATGGTGG TTTCCGGCGA CAAGCGCCAT
GCCAAGGACT ATATCGAAGG CCTCGACATG CTGGCCTCGA TGCGTCTGTG TGCTAACGCA
CCGGGGCAGC ACGGTATCCA GACGGCCTTG GGTGGTTATC AGAGTATCAA TGATCTAATC
AAGGACGGCG GTCGCCTACG TCGTCAGCGC GACATCGCCC ACGAGCTGAT TACAGCCATT
CCTGGCGTCA CCTGCGTCAA GCCGAAGGCC GCGTTGTACA TGTTCCCAAG GCTTGACCCG
AAGATTTACC CGATCAAGAA CGATCAACAG TTCATTTCCG AGCTGTTGCA GGAAGAGAAA
GTGTTACTGG TTCAGGGGAC TGGCTTCAAC TGGCCGCATC CCGACCATTT CCGTCTTGTC
TTCCTGCCGC ACGAGGATGA CCTGCGGGAA GCAGTCGCAC GTATTGCCCG CTTTCTTGAA
AATTATCGCA AACGTCACAA CACCAACCAA CTTATCAAAG ACTGA
 
Protein sequence
MKHVKKSAKL ANVCYDIRGP VLQKAKQMEE EGHKIIKLNI GNLAAFGFDS PEEIQQDMIR 
NLPNAAGYTD SKGIFAARKA IMHYTQQKGI KGVTLEDIYV GNGVSELIVM AMNALLDAGD
EVLVPAPDYP LWTAAISLSG GTPKHYLCDE SKGWLPDLDD IRSKINAHTK AIVLINPNNP
TGALYPDDLL YEIIDIARQH HLTIYADEVY DKVLYDDVKH TSIASLAEDV LMITFNGLSK
NYRSCGYRAG WMVVSGDKRH AKDYIEGLDM LASMRLCANA PGQHGIQTAL GGYQSINDLI
KDGGRLRRQR DIAHELITAI PGVTCVKPKA ALYMFPRLDP KIYPIKNDQQ FISELLQEEK
VLLVQGTGFN WPHPDHFRLV FLPHEDDLRE AVARIARFLE NYRKRHNTNQ LIKD