Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_2387 |
Symbol | |
ID | 3568601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 2572908 |
End bp | 2574152 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637680854 |
Product | aminotransferase AlaT |
Protein accession | YP_285593 |
Protein GI | 71908006 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACACG TCAAGAAATC CGCCAAACTC GCCAACGTCT GCTACGACAT TCGCGGCCCC GTGCTGCAAA AAGCCAAGCA GATGGAGGAA GAGGGTCACA AGATCATCAA GCTGAACATC GGCAACCTGG CCGCGTTCGG TTTTGATTCG CCCGAGGAAA TCCAGCAGGA CATGATCCGC AACCTGCCGA ATGCGGCTGG TTATACGGAT TCCAAGGGTA TTTTCGCGGC GCGTAAGGCG ATCATGCATT ACACCCAACA GAAGGGCATC AAGGGCGTGA CGCTGGAGGA TATCTACGTC GGTAACGGCG TGTCCGAACT GATCGTCATG GCCATGAACG CCTTGCTCGA TGCCGGTGAC GAAGTGCTGG TCCCGGCGCC GGATTACCCG CTATGGACGG CAGCGATCAG CCTGTCCGGC GGAACGCCAA AGCATTACCT GTGCGACGAG AGCAAGGGCT GGCTGCCAGA TCTCGACGAT ATCCGCAGCA AGATCAACGC CCACACCAAG GCGATCGTGC TGATCAACCC GAATAATCCG ACCGGCGCCC TTTACCCGGA TGATCTGCTG TACGAGATCA TTGACATCGC CCGTCAGCAT CACCTGACTA TCTACGCCGA CGAGGTGTAC GACAAGGTGC TCTACGACGA TGTGAAGCAC ACGTCGATTG CCTCGCTGGC CGAGGATGTG CTGATGATCA CGTTCAATGG TCTGTCGAAG AACTATCGTT CTTGCGGTTA TCGTGCCGGC TGGATGGTGG TTTCCGGCGA CAAGCGCCAT GCCAAGGACT ATATCGAAGG CCTCGACATG CTGGCCTCGA TGCGTCTGTG TGCTAACGCA CCGGGGCAGC ACGGTATCCA GACGGCCTTG GGTGGTTATC AGAGTATCAA TGATCTAATC AAGGACGGCG GTCGCCTACG TCGTCAGCGC GACATCGCCC ACGAGCTGAT TACAGCCATT CCTGGCGTCA CCTGCGTCAA GCCGAAGGCC GCGTTGTACA TGTTCCCAAG GCTTGACCCG AAGATTTACC CGATCAAGAA CGATCAACAG TTCATTTCCG AGCTGTTGCA GGAAGAGAAA GTGTTACTGG TTCAGGGGAC TGGCTTCAAC TGGCCGCATC CCGACCATTT CCGTCTTGTC TTCCTGCCGC ACGAGGATGA CCTGCGGGAA GCAGTCGCAC GTATTGCCCG CTTTCTTGAA AATTATCGCA AACGTCACAA CACCAACCAA CTTATCAAAG ACTGA
|
Protein sequence | MKHVKKSAKL ANVCYDIRGP VLQKAKQMEE EGHKIIKLNI GNLAAFGFDS PEEIQQDMIR NLPNAAGYTD SKGIFAARKA IMHYTQQKGI KGVTLEDIYV GNGVSELIVM AMNALLDAGD EVLVPAPDYP LWTAAISLSG GTPKHYLCDE SKGWLPDLDD IRSKINAHTK AIVLINPNNP TGALYPDDLL YEIIDIARQH HLTIYADEVY DKVLYDDVKH TSIASLAEDV LMITFNGLSK NYRSCGYRAG WMVVSGDKRH AKDYIEGLDM LASMRLCANA PGQHGIQTAL GGYQSINDLI KDGGRLRRQR DIAHELITAI PGVTCVKPKA ALYMFPRLDP KIYPIKNDQQ FISELLQEEK VLLVQGTGFN WPHPDHFRLV FLPHEDDLRE AVARIARFLE NYRKRHNTNQ LIKD
|
| |