| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2351 |
|---|
| Symbol | |
|---|
| ID | 3566033 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 2534195 |
|---|
| End bp | 2535748 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637680818 |
|---|
| Product | acyl-CoA synthetase |
|---|
| Protein accession | YP_285557 |
|---|
| Protein GI | 71907970 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 0.197387 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.399216 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCACA AATTGACACC GGAAATCAAA CAAAGCATTC GCAACACGCT GGGCGACGCC
CTGCAGCGCT CGGTTCGCCG CTGGCCCAGC AAGGAAGCCT TGCTCTATGG CGCTCGGCGC
TGGACATTTC AGCAACTGGC GCAGGCGGCT AATCGCGTGG CCAACGGTTT GCTGGCCAGG
GGCCTGCAGC CGGGCGACCG GGTGGCCGCT TACGGCAAGA ACTCGGATGC CTACGTGCTG
CTCTGGCTGG CGTGCAACCG GGCCGGCCTG ATTCACGTGC CGATCAATTA CGCCCTGACC
GAAGGGGAGT TGAAGTACAT CCTAGACCAG TCGGGTGCCA AGGCGGTATT TCACGATGTA
GCCATTGCCG GACATGTCGA ACATCTGAAG CCTGAGTTGC AGTGTGCCCT TTACGGTACC
TTCTACGACG GCGGCGATCT CGATGTCCTG GCCATGGCGC AGGCGCGCGG AAACGAGCAA
ATGCCGGCGG TTACCATCGA CGAAAACTGC GTCGCGCAGA TTCTTTATAC CTCTGGCACG
ACGGCCAACC CCAAGGGGGC CATGATGACC CACCGGGCCC TGCTGGCCGA ATACGGCAGT
GCCATCGTCG CGCTTGAAAT CAGCGCCTCC GACCGCTCGC TGGCTTCACT GCCGCTCTAC
CACTCGGCGC AGATGCATGC CTTCCTGATG CCGCAATTGC TGATGGGGGC GACAACGCTG
ATCATCGCGG CGCCGGTGCC CGATATCTGT TTCGACGTGA TCGCGCGGGA GGGCATTACC
TCGTTCTTTG CGCCGCCGAC GGTCTGGATT TCTCTGCTCC GCCACCCGGG TTTCGATACG
CATGACTTGT CCTGTCTGCG CCGTGGCTAT TACGGGGCGT CGATCATGCC CGTGCCGGTG
CTTGAAGAGC TGCGCCACCG CCTGCCTTCG ATGCGGGTGT TCAACTGCTA CGGTCAAAGC
GAGATCGCGC CGCTGGCTAC GGTGTTGTCG CCCGAGGATC ATCTGATCGC GCCGGCTTCG
GCCGGGCGGC CGGTGATGAA CGTCGAGACC CGCGTCGTCA ATGAACAAAT GGAAGACATG
GCGCCGGGCG AGATGGGGGA AATCATCCAT CGCTCGCCGC AGGCGATGAT CGGCTACTGG
GACAAGCCGG ATCAGACCGA AGAGGCTTTC CTGGGCGGCT GGTTCCATTC CGGCGACGTC
GGTTACATCG ACGAAAACGG TTTCCTGTTC ATTTGCGATC GCATCAAGGA CGTGATCAAC
ACTGGCGGCG TGGTGGTTTC CAGCCGCGAG GTCGAGGAGT GTCTCTACAC CCATCCGGCC
GTCGCCGAAG TGGCAGTGAT TGCGCTGCCC GATGAAAAAT GGGTCGAAGC GGTGAGTGCC
GTCGTCAGCT TGAAGGTCGG GGCTCAGGTC AGCGAAGCGG AGTTGATCGA TTTTGCCAAA
GGCCGGATTG CCCCTTTCAA GGTGCCGAAA AGCATCTTCT TCAAACAGGA ATTGCCCCGC
AACACTGCCG GCAAACTGTT GAAACGCGAG TTGCGTCGGG AATATTCGGT CTAG
|
|---|
| Protein sequence | MEHKLTPEIK QSIRNTLGDA LQRSVRRWPS KEALLYGARR WTFQQLAQAA NRVANGLLAR
GLQPGDRVAA YGKNSDAYVL LWLACNRAGL IHVPINYALT EGELKYILDQ SGAKAVFHDV
AIAGHVEHLK PELQCALYGT FYDGGDLDVL AMAQARGNEQ MPAVTIDENC VAQILYTSGT
TANPKGAMMT HRALLAEYGS AIVALEISAS DRSLASLPLY HSAQMHAFLM PQLLMGATTL
IIAAPVPDIC FDVIAREGIT SFFAPPTVWI SLLRHPGFDT HDLSCLRRGY YGASIMPVPV
LEELRHRLPS MRVFNCYGQS EIAPLATVLS PEDHLIAPAS AGRPVMNVET RVVNEQMEDM
APGEMGEIIH RSPQAMIGYW DKPDQTEEAF LGGWFHSGDV GYIDENGFLF ICDRIKDVIN
TGGVVVSSRE VEECLYTHPA VAEVAVIALP DEKWVEAVSA VVSLKVGAQV SEAELIDFAK
GRIAPFKVPK SIFFKQELPR NTAGKLLKRE LRREYSV
|
|---|
| |