Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_2345 |
Symbol | |
ID | 3566065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 2525148 |
End bp | 2526761 |
Gene Length | 1614 bp |
Protein Length | 537 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637680812 |
Product | 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase |
Protein accession | YP_285551 |
Protein GI | 71907964 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase |
TIGRFAM ID | [TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 0.441321 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.274821 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATA TCGGCACGCT CAATTTCACT TGGTCGCAAG CCATCATTGG CGGTTTCGTC GCTGCCGGCA TTACTGACGC GGTCATCTCG CCTGGATCAC GCTCAACACC TCTGGCGCTT GCCATGCTCA GACAAGCTGG TCTGCGCTGC CATATCGCGA TTGACGAGCG TAGCGCCGCT TTTTTTGGAT TGGGCCTAGC CAAGAGCAGC CATTGCCCGG TGCTATTGTT GGCTACATCG GGGACTGCAC CGGCGAATTG GTTGCCGGCC GTGATTGAGG CCAGCCAGTC CGGCATACCA CTGATTCTGA TTTCCGCCGA TCGCCCACCG GAGCTTCAAG ACTGCGGCGC CAACCAGACC GTCAGCCAGC CAGGCCTGTT CGGCTCCCAC ACGCGAGCCA GCTACACATT GGGCACACCG GAGCCGGGCT TTAACCCTGG CTACTTGCAT CGCGTGGCCA GACAGGCCTG CGAGCAGGCA AGCTGGCCAC ACCCCGGCCC CGTCCATATC AATCAGCCAT TCCGTGAGCC AATGCTGCCA TCAGAGCCAG TACTCTCTGG GGAAATGCCG GAAAAAATAA GCATCTCCCA TCCCGACCTC CAGCCGGACC TGAATGCACT AGGCGATCTG GCCCGACGTA TCTCCGGCCG GCCTGGCATC ATCGTTTGTG GCGAGATGCC GTCCCGCGAT GGACAAAACG AAGCGCTCGT CGCGCTGGCA ACTCGGCTGC GTAGCCCGAT TTTCGCTGAA CCCCTGTCCG GTCTTCGTTT CGGTCCACAT GATCGCTCGC ACCTTTGCGT CCGCTACAAC GACTGGCTAG GCAAAACCGA TCTTGTGAGT CAGTACAGGC CGGAATGGGT CATTCGTTTT GGCGCCTATC CAGTTACCCG AAACTTGCAG AAGCTCGTCT CCGAGATCAC GGAGACACAC GCGCTCGTCG ACCCATGGCC ACGCTGGATC GATCCGGCAC GCAGACTGAC TCACTTGCTA CGCTCGGAAC CTGCGGCTAT TTGTAAAGCA CTGCTGGATC TTTCTCTTGT GCCGTTTTCC GAGACATGGC TTTCCGCCTT GGCCAAGTTT GAAGGGAACG CCGAAGCGGA CGAGCAAAGA AACCATATTC ACGTACTGCT CGAAGAAGTG CCGGACGATA CGGATCTATT CGTCGGCAAC TCCCTGGCCA TTCGGCAAAT GGACACCCAT TCCGGCAGTG CCGACAAGAC ACTTCGCATT TACGCCAATC GTGGCGCCAG CGGCATCGAC GGCAATATTT CCACTGCAGC AGGAATTGCG GCCAGCCGTG GGCGGGCGGT TGCCCTGATT GGGGACCTGA CCTGCCAGCA CGACCTTGGA GGCCTGGCCC TGGCCCAGGG CCAGAACATA GTCATCATCG TGGTCAACAA CGGCGGCGGC GGTATTTTTG ATCACCTGCC CCAACGTGAT CTGCCCGAAT TCACCCAAGG CTGGCGTACG CCACAAAATG TAAACTTCGA GCACGCGGCA ATGGCCTTCG GTTTAGGCTA TGCCGCTACC CATTCCGATG ACGATTTACG GCCGGCCCTG CGCCACGCAT TTGCTGCTGG CGGCCCGCAC CTGATCGAAC TCAGGCAATG CTGA
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Protein sequence | MTDIGTLNFT WSQAIIGGFV AAGITDAVIS PGSRSTPLAL AMLRQAGLRC HIAIDERSAA FFGLGLAKSS HCPVLLLATS GTAPANWLPA VIEASQSGIP LILISADRPP ELQDCGANQT VSQPGLFGSH TRASYTLGTP EPGFNPGYLH RVARQACEQA SWPHPGPVHI NQPFREPMLP SEPVLSGEMP EKISISHPDL QPDLNALGDL ARRISGRPGI IVCGEMPSRD GQNEALVALA TRLRSPIFAE PLSGLRFGPH DRSHLCVRYN DWLGKTDLVS QYRPEWVIRF GAYPVTRNLQ KLVSEITETH ALVDPWPRWI DPARRLTHLL RSEPAAICKA LLDLSLVPFS ETWLSALAKF EGNAEADEQR NHIHVLLEEV PDDTDLFVGN SLAIRQMDTH SGSADKTLRI YANRGASGID GNISTAAGIA ASRGRAVALI GDLTCQHDLG GLALAQGQNI VIIVVNNGGG GIFDHLPQRD LPEFTQGWRT PQNVNFEHAA MAFGLGYAAT HSDDDLRPAL RHAFAAGGPH LIELRQC
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