Gene Daro_2280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2280 
Symbol 
ID3566272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2465264 
End bp2466406 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content67% 
IMG OID637680747 
Producttetrahydromethanopterin S-methyltransferase subunit A 
Protein accessionYP_285487 
Protein GI71907900 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4063] Tetrahydromethanopterin S-methyltransferase, subunit A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones68 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.882488 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACGC CTGGACTCGA CGCCATACAG GAGCAGATGC ACCTGGCCAT GGCGGCGACC 
AAGTGCCACC GCTGTGGCTG CTTCCAGGAT ACGGTGCAGG CGCTGGAGAA CTCGCCGCGT
ATTCGGGCGG TGCTGCCCGA GCTGATCGCG GAAGCACGGA ACCTCTTCGA GCCCAAGCGC
TATGAATGCC TTGGCTGCGA GGTGTGCTGG CCGGCGGTGG CCACCAACGC CGCAGCGGAG
ATCGATCCGG CGGTGGCAGA GACTGCTCAC TGCGCGACCG CCGAACCGCA GGAGCGTGAA
GGCTGGCCGC CGCTGCCGGG GGACTATCAC GTCGTACGCT ACCAGGCGCC GGTGGCGGTC
TGCACCCTCA ACTCGGATGA CCTAGTGGTC CGCCTGACCG CCACCCAGGC GCCGGGACTT
GCCGTTGTCG GGAGCCTGCA TACCGAAAAC CTCGGCATCG AGCACCTGAT CCGCAACCTG
CTGCCCAATC CCCATATCCG CTTCCTCATA GTTTGCGGCG AGGACACCAG GAAAGCCATC
GGCCACCTGC CGGGCCAGTC CCTCGTGGCC TTGATGCGGA ACGGCCTGGA AGATGGCGGC
CGTATTCGCG GCGCCGAGGG CAAGCGTCCG GTAATCAAGA ACGTGCCCCC GGAGCATGTC
GAGGCGTTCC GGCGGCAAGT GCAGGTGGTG GACTGCATCG GGATGACCGA TCTGGAAGGC
ATTGCCGCCG AGATTGCCAG GGCAGCCGCT GACGACCCCG GGCCGGCGCC GGAAATTTTC
ACCGACCTAC CCGCGATCCC GGTCCGGCAG GCGGAAGAAC CCAGCCGTTT GGTGTCCGAC
CCGGCCGGCT ACCTGGTCCT CTACCCCGAC CGGCGACGAA GCCGCTTGGT ACTGGAGCAC
TACGCCAACA GCGGCACCTT GACCCGGGTG ATCGAGGGGA CGACGCCGAC CGCACTTTAT
AGCACGGTGA TCGAAGAAGG ACTGATCTCC CGACTGGATC ACGCGGCCTA CCTGGGCCGG
GAACTCGCCC GGGCGGAAGC CGCGCTCCGG GACGGGCACG ACTACGCGCA GGATCGGGCG
CCCGGAGAAA TCGAAGCCCC CGCACCGGTG GCCAAGTGTG GCTGCTCGGG TGCCTGTCAT
TGA
 
Protein sequence
MSTPGLDAIQ EQMHLAMAAT KCHRCGCFQD TVQALENSPR IRAVLPELIA EARNLFEPKR 
YECLGCEVCW PAVATNAAAE IDPAVAETAH CATAEPQERE GWPPLPGDYH VVRYQAPVAV
CTLNSDDLVV RLTATQAPGL AVVGSLHTEN LGIEHLIRNL LPNPHIRFLI VCGEDTRKAI
GHLPGQSLVA LMRNGLEDGG RIRGAEGKRP VIKNVPPEHV EAFRRQVQVV DCIGMTDLEG
IAAEIARAAA DDPGPAPEIF TDLPAIPVRQ AEEPSRLVSD PAGYLVLYPD RRRSRLVLEH
YANSGTLTRV IEGTTPTALY STVIEEGLIS RLDHAAYLGR ELARAEAALR DGHDYAQDRA
PGEIEAPAPV AKCGCSGACH