Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_2221 |
Symbol | |
ID | 3566447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 2399873 |
End bp | 2404882 |
Gene Length | 5010 bp |
Protein Length | 1669 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637680690 |
Product | helicase, C-terminal |
Protein accession | YP_285430 |
Protein GI | 71907843 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG4646] DNA methylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.332048 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGTC CTACCGCGCC TTCCCTGTGG CTGCCCGGTT TCGACCCGGC GGCCCCGACC CTGCCCCGCC CTGCAGAGCA GGTTTGCCTT TCCGTTTCTT GCGGGCCCGG CGAGCCTGTC GAAGTCATCC ACGTCGAGAA CCTCAGCGAC GTCGAGCAAG AGCAGTCTGT AGTCTCTGTC CGCGCCAACT GGCGGGTGGT GGCCACCGCG CCCGAGGCCG CCCCGCGCAT CCTCTGGCCG CAACTGACCC GCGCCGACCA GGAGCACCTG ACCGGCCCGA CCGCGAAGTT CGAGGCCAAC TTGGCAGCGA TCACGCTCCT TCGGGAGATC GAAGCCGAAG TCCGGCCGGC CAGTACGGAT GATCGCCAGG TTCTTCGGCG CTACACCGGC TGGGGCGGCC TGCCCGCCAG CTTCAATCTC GAAGCCACCG ACAGTGCCTG GGGCGAACGT GCCCGTCGCT TGCAGGCGAT GCTCAGTGCC GAGGACTTCG AATCGGCGCG CGCCTCCGTC AACAACAGCC ACTACACCGA GGTCCCCGTG ATCGAGGCGA TATGGCAGGC GGTGGAGCGC TTCGGTTTCA CCGGCGGACG CATCCTGGAA CCTGCCGCCG GCATCGGCCA TTTCATCGGC GCCATGCCGC GGAATCTGGC CGAGCGCAGC AGCGTCACTG CCATCGAGAT CGACCGGGTT TCCGGCCGCA TCCTCAACGC GCTCTACGCG CCCGGCGGCG TGGATGTGCG GATTTCGCCG TTCGAGAAAA CCCCGCTGCC CGACCACTGG TTCGACCTCG TGATCGGCAA CGTCCCCTTT GGCAAGTACA AGGTCGCCGA CGTGAGCAAC CGGGCCTATT CCCGCTTCAG CATCCACAAT TACTTCTTCG GCCGCGCCCT CGACCTGGTG CGCCCCGGTG GGCTGGTGTG CTTCATTACC AGCAGCCACA CGATGGATGG CCAATACGAC GCGGTGCGCG AGTACATCGC AAGTCAGGCT CACCTGCTGG GTGCCATCCG GCTCCCCAAG GGCACCTTCG CTGGCATCGC CTCGACCGAA GTGCAGACCG ACATCCTGTT TCTGCGCAAG CGGCAGCGGG CCGAGACGGT TGAGGCCAAA TGGTTGAAAC TGGGCACGGT GCCCGATAGT CTCCGGCACC CTCAGTGCTA CGAGCGCTAC CTGCCGATCA ACGCCTGGTA CGCCGAGCAC CCGCAGTTCT GCATTGGCCG CATCCGCCGC GAGAGCAATG GCTACGAGGA AGTACCGGTC GCCGTGTTCG AGGGCGACCT GGAGGCGGCC CTGGCCGAGC GCATCGCTTT GCTGCCTGCC GGTGCTTACC GGCCGGTGGC GCACAAGGCA GCCCCGCTGC GAGTGGTGGT CCCGGCCGAT GCCGGTGCCC GTCCTGGCAG CTACCATCTC CACCAGGGGC GGGTGCATCG GGTCGAGGGC AGCGAGATGG TCGACGTCCA TGACCAGCTC AATGCCACGC AGCGGGCCCG CGTCACCGGC CTGTGTGCCA TCCGCGACCA CGCCCGGGCC CTGCTCGATG CGCAGTTGGC GGATGCGGGC GACGGTCGGC TGGGTCACCT GCGAGCCATG CTCAATGGGA CCTACGAGCG CTTTGTATCG CGCTATGGCT GCCTGTCCAC GCGCGCCAAT GCGCTGGCGT TCCGGCGCGA CCCGGACTAT CCGCTGTTGC TGTCGCTGGA ACATTACGAC GAAGAGGCCG ACACGGCCCG CAAGGCTGCG CTGTTCTCCC GGCGCACGCT GATCCGTGTC GTCGAACCGA GCACGGCGGC CGAGCCGGCC GAAGCCCTGG CTGCGTCCAT CCAATGGCGT GGCCGGGTCG ATCCGGCTTA CATGGCCGAA ATTCTTGGGG CACCCGAAGC TGCGGTGCTG GAGGCCTTGG CCGGAGCGGG GCAGGTGTTC CTCGACCCGG CCGACGGGGA ATGGAAGACC ACCGACGACT ACCTGTCGGG CAACGTGAAA GCGAAGATCA AGCAGGCGGT GCTGTCCGGG AGTACCTACC AGCGCAACAT CGACGCGCTG GAACAGGTGC AACCAGAAGA CCTGCCCCCG GCGGCCATCG AGCCGCGCCT GGGGGCGGTG TGGATTCCGG CCCTTGATGT CGAGGCGTTC ATCCAGCAGG TCCTGGAACT CAAGGACTGC CAGGTGGGCT ACTCGGCCGA AGCCGGCGCC TGGTCGGTGA AGTACGGCGA GTGGGAAGCG CGGCAGAACG TGAAGGTGAC CCAGGAATTC GGCACCTCGC GCATGAACGC GATCGAACTC GTGCAGTGCG CGCTCAATGT GCAGGTGCCG ACCGTGCGCG ACCGCGATCC GCTGACCGAC AAGTACTTCG TCAATCCCGA CGAGACGCTG GCGGCGCGGG AGAAGCTGGG CCTGATCAAG GAGCGGTTCG CCGGCTGGGC CTTCGAAGAT ACCGAACGCC GCGAGAAGCT GTGCAGGATC TACAACGACC TGTTCAACGC CACGAGGCCC AGGCGCTTCG ATGGCTCGCA CCTGAAGCTG CCGGGATTCT CCCGCTGCTT CGTGCTGCAT CCGCACCAGC TGGATTCGGT GTGGCGCATC GTGCAGTCCG GCAACACTGG GCTGTTCCAT GTGGTCGGCG CGGGCAAGAC GGCGGTATGC GTCATCGCCA GCATGGAGTT GCGCCGGCTG GGTTTCGTCA ATAAGCCCTG CCATGTGGTC CCCAACCACA TGCTGGCCCA GTACACGGCA GAATTCGTCC GACTCTATCC GAACGCATCG GTGCTGATGG CGGGCAAGGA GGACCTGGCA GGCGACCGCC GGCGCGAGCT GGTGTCGCGC ATCGCCACGG GCGATTGGGA CGCGGTAGTC ATCACGCACT CGAGCTTCGA GCGCATCAGG ATGTCGCCGC GATTCAGCGA GCGATTCATC AAGGAGATCA TCCATGAAAT AGAGATGGCG GTACGCGCCG AGAAGAGCAA CGACCGGTCC AACCGGATCG TCAAGCAACT CGAGGCGATG AAGAAGAACT GGACGGTGCG GCTGGAAAAA CTATCGGCCG ACCAGAAGAA GGACGACCTG CTCAGTTGGG AGTTGCTGGG TATCGACGCC CTGTTCGTGG ACGAGGCCCA CCTGCACAAG AACCTCTACC GGTTCACCAA GATGACGCGG GTGGCCGGTC TGCCGCTGAC CAGTTCGGAG CGCGCCTTCG ATCTGTTCCT GAAGACGCGC TACACGATGC AGCTCCACGG GCATGCGCAG CGTGGGGTGG TATTCGCCAC GGCGACGCCG GTGGCCAACA CCATGGCCGA GATCCACACC ATGATGCGCT ACCTGCAGCC CAACCGGCTG GCGGAGCTCG GGCTGCAGCA GTTCGATGCC TGGGCCGCCA CCTTCGGCGA AAGCGTCACG GCGCTGGAGA TCGCGCCGGA CGGCAGCGGC TATCGGATGC ACACGCGCTT CGCGCGGTTC ATCAACGTGC CAGAGCTGAT GGCGGTGTTC GGCGAAGTAG CCGATATCCG CACGGCGGAG ATGCTGGACC TGCCGGTGCC GAAGCTGCGC GGCGGCAAGC CGCGCATCGT CGCCTGCCCG GCCAGTCCGT CGCTGAAAGC CTTCGTGCAG ACGCTGGTCC AGCGGGCGGA AGCCGTCCGC AACGGCGACG TCAAGCCGAA CGAAGACAAC ATGCTGGCGA TCACCACCGA CGGCCGCAAG GCCGCGTTGG ATTTCCGGCT GGTGGCGCCG CTAGCGCGCT TCGACGAGCA CGGCAAGGTG GCCGCCTGTG TGCGGGAGGT CCATACCATC TGGCAACGCA CGGCGGACTT CCGCGGCGCC CAGTTGGTGT TCTGTGACTT GTCGTCCCCC AAGGGCGGCA AGAGCTTCAG CGTCTATGAC GATCTGCGGG AGCGGCTGAT CGGTGCGGGC ATCCCCGAGA AGGAGATTGC CTTCGTCCAT GCTGCCGAGA CCGATGTCCA GAAGGCGACG CTGTTCAAGG CGGTGCGCGA GGGCCGGGTC CGGGTGCTGC TGGGCTCCAC CGCCAAGATG GGGGTGGGCA CCAATGTGCA GACACGTCTC ACGGCCCTGC ATCACCTCGA TGCGCCCTGG CGTCCCTGCG ACGTCGAGCA GCGCGAGGGG CGCATCCTGC GCCAGGGCAA TGAGTGCGAG GAAGTGGAAA TCTTCCGATA TGTCACGGAA GGCAGTTTTG ACAGTTACAT GTGGCAGACG CTGGAGACCA AGGCGCGCTT CATCGCCCAG GTGATGAAGG GCGACCAGGG CATCCGGTCG CTGGAGGATG TGGAATTGGC GGCGCTGTCC TATGCCGAGG TGAAAGCCTT GGCGTCGGGC AATCCGCTGG TGATCGAGAA GGCCGGCGTG GACGCGGAGG TGGCCAAGCT CTCGACGCTG TTCTCGGTGT GGCGCAACCA GCGCTATGCC AACGAAAGCG AAGTGGGCCG GCTGCCGATG ATGATCGAGG CGCTGGAGAA GAAGGTCGCG CTGTACGCAC AGGACGCGGC CCGGATCGAG CCGCAGACTA TGCAGGGCAT CGCCGTGGAA CTGGCGGGGC GCCGGATCGT CGGCCCCGAT GGGGTCGGCG AGGCTCTGCG CGGGTTGGTG AGGACGGCCA AGGAAGAGGT ACGCACGGCC AGCCGGATGA TCGAACGGAT CGTCGGCCGC TTCGGCGGCT TCGACCTCGG TATCCTCGCG GCCCGCGGCG ACGAGACCCC CAGCCTGTAC CTGGCGGGAC ATTGCCTGTA CAACGCCGAG CCCTATCAAA CGGGTCCGGC CCTGGTGGCC GCCTTGCTGG CAGCGCTGGA TTCGGTGGGC AAGCATCACG CCGATGCCGG GATCCAGTTG GAAACTCGCC GCAAGCGGCT GGAAGACCTC CGGCTGGAGT TGGCCCGCTC ATTCGAGCAC GAAGGCCGGC TGACCAACCT GCTGGTCCGG CAACGCGAGT TGCTCAAGCA GCTCGACCTG GACAAGGACG AAGCCGGTAG CGCGAAGGTC GACGCCGACG AGGCACGGCA AGCCGCTTGA
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Protein sequence | MARPTAPSLW LPGFDPAAPT LPRPAEQVCL SVSCGPGEPV EVIHVENLSD VEQEQSVVSV RANWRVVATA PEAAPRILWP QLTRADQEHL TGPTAKFEAN LAAITLLREI EAEVRPASTD DRQVLRRYTG WGGLPASFNL EATDSAWGER ARRLQAMLSA EDFESARASV NNSHYTEVPV IEAIWQAVER FGFTGGRILE PAAGIGHFIG AMPRNLAERS SVTAIEIDRV SGRILNALYA PGGVDVRISP FEKTPLPDHW FDLVIGNVPF GKYKVADVSN RAYSRFSIHN YFFGRALDLV RPGGLVCFIT SSHTMDGQYD AVREYIASQA HLLGAIRLPK GTFAGIASTE VQTDILFLRK RQRAETVEAK WLKLGTVPDS LRHPQCYERY LPINAWYAEH PQFCIGRIRR ESNGYEEVPV AVFEGDLEAA LAERIALLPA GAYRPVAHKA APLRVVVPAD AGARPGSYHL HQGRVHRVEG SEMVDVHDQL NATQRARVTG LCAIRDHARA LLDAQLADAG DGRLGHLRAM LNGTYERFVS RYGCLSTRAN ALAFRRDPDY PLLLSLEHYD EEADTARKAA LFSRRTLIRV VEPSTAAEPA EALAASIQWR GRVDPAYMAE ILGAPEAAVL EALAGAGQVF LDPADGEWKT TDDYLSGNVK AKIKQAVLSG STYQRNIDAL EQVQPEDLPP AAIEPRLGAV WIPALDVEAF IQQVLELKDC QVGYSAEAGA WSVKYGEWEA RQNVKVTQEF GTSRMNAIEL VQCALNVQVP TVRDRDPLTD KYFVNPDETL AAREKLGLIK ERFAGWAFED TERREKLCRI YNDLFNATRP RRFDGSHLKL PGFSRCFVLH PHQLDSVWRI VQSGNTGLFH VVGAGKTAVC VIASMELRRL GFVNKPCHVV PNHMLAQYTA EFVRLYPNAS VLMAGKEDLA GDRRRELVSR IATGDWDAVV ITHSSFERIR MSPRFSERFI KEIIHEIEMA VRAEKSNDRS NRIVKQLEAM KKNWTVRLEK LSADQKKDDL LSWELLGIDA LFVDEAHLHK NLYRFTKMTR VAGLPLTSSE RAFDLFLKTR YTMQLHGHAQ RGVVFATATP VANTMAEIHT MMRYLQPNRL AELGLQQFDA WAATFGESVT ALEIAPDGSG YRMHTRFARF INVPELMAVF GEVADIRTAE MLDLPVPKLR GGKPRIVACP ASPSLKAFVQ TLVQRAEAVR NGDVKPNEDN MLAITTDGRK AALDFRLVAP LARFDEHGKV AACVREVHTI WQRTADFRGA QLVFCDLSSP KGGKSFSVYD DLRERLIGAG IPEKEIAFVH AAETDVQKAT LFKAVREGRV RVLLGSTAKM GVGTNVQTRL TALHHLDAPW RPCDVEQREG RILRQGNECE EVEIFRYVTE GSFDSYMWQT LETKARFIAQ VMKGDQGIRS LEDVELAALS YAEVKALASG NPLVIEKAGV DAEVAKLSTL FSVWRNQRYA NESEVGRLPM MIEALEKKVA LYAQDAARIE PQTMQGIAVE LAGRRIVGPD GVGEALRGLV RTAKEEVRTA SRMIERIVGR FGGFDLGILA ARGDETPSLY LAGHCLYNAE PYQTGPALVA ALLAALDSVG KHHADAGIQL ETRRKRLEDL RLELARSFEH EGRLTNLLVR QRELLKQLDL DKDEAGSAKV DADEARQAA
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