Gene Daro_2177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2177 
Symbol 
ID3566671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2351368 
End bp2351880 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content56% 
IMG OID637680646 
Producthypothetical protein 
Protein accessionYP_285386 
Protein GI71907799 
COG category[S] Function unknown 
COG ID[COG3516] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03358] type VI secretion protein, VC_A0107 family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.00000000024001 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGAAAA AAGAGAGTGT TCAAAAGCGG TTGCAAAAGG TTCGTCCGCC GCGCGTTCAG 
CTAACCTACG ATGTTGAGAT CGGCGATGCC CTCGAGGTCA AGGAGTTGCC CTTTGTGGTT
GGCGTACTAG GGGATTTTGC TGCCCAGTCA AAAGAGCCGC AGGGCAAGGT TCGCGATCGC
AAGTTTGTGA ACGTTGATAT GGACAATTTC GACGATGTCA TGGAAGGCAT GGCGCCGCGC
GCTGCATTCC GCGTCAAGAA CCGACTGACC GAAGCCGGTG GCGAACTGGG CGTCGATATC
AAGTTCGAAA AATTCGAGGA TTTTCGCCCG GAGTCTGTGG TTCAGCAGGT TGAACCGCTG
CGCAAGCTGC AGGAAGCGCG GGCCAAGCTG GCCGATCTCC GTAACAAGCT GGCCGGCAAT
GAAAAGCTTG AAGATCTGCT GAATGATGTC CTGAACAGCA CCGAGCAGTT GCAGAGTCTG
GGCGGCAAGA CGAACGCAGG AGACGGACAA TGA
 
Protein sequence
MAKKESVQKR LQKVRPPRVQ LTYDVEIGDA LEVKELPFVV GVLGDFAAQS KEPQGKVRDR 
KFVNVDMDNF DDVMEGMAPR AAFRVKNRLT EAGGELGVDI KFEKFEDFRP ESVVQQVEPL
RKLQEARAKL ADLRNKLAGN EKLEDLLNDV LNSTEQLQSL GGKTNAGDGQ