Gene Daro_2172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2172 
Symbol 
ID3569814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2345929 
End bp2346993 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content60% 
IMG OID637680641 
Producthypothetical protein 
Protein accessionYP_285381 
Protein GI71907794 
COG category[S] Function unknown 
COG ID[COG3520] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03347] type VI secretion protein, VC_A0111 family 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value0.17033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACCT CGCAACGGCG ACTCGATCCT GGCCTAGTCG ATAGCACCCT TGAGGCGCCG 
GAACGCTACG AGTTTTTCCA GCTCGTGCGT CTGTATGAAA GCGTCTTCCG GAAAACGGCC
CGGACAGCCG GTGGCGATGT CGTCAACGAG CGGATTCGCT TCCGTAATTC GTTGCGTCTC
GGCTTTGCAC CCAGCCAGGT CGACGCCATG GCACCGAGTT ACCGGATCGA TGAAGAAGGG
CTGGCTACCG CCGATCTGGA GCGGGTCGAG ATCACGCCAA GTTTCATGGG TATGCTGGGC
GTCAATGGCA CGCTGCCGAT TCATTACACC GAGCAGGTCA TCAACCAGGC GCGCTTCAAG
CGTGATGACT CCGGGCGGGC ATTCCTCGAT CTGTTCACCA ATCGCTCGGT TGGTCATTTC
TACCGCGCCT GGAAGAAATA CAAGCTGCCG ATCCAGTATG AAACGGATCG GCAGAACCGT
TTTCTCCCGA TTATTCTGGC GCTGAGCGGA CTGGGCTTTG ATGCCTTGCG TCAACGCATG
AATGAAGGAC CAGGCGCCAT CGACGATGAG TCGATTGCCT TCTTTGCCGG CCTTTTGCGG
CAGCGGCCGG TCTCGGCCGA AACCCTGCAG CGCGTGATCA GCGGCTATTT TCGCGAAAGC
GTCGAAGTTG AACAGTTCGT CGGGCATTGG TATGCCATTC CTGCTGAGCA GCGCTCGACG
CTGGGTGGCC ACAACGTCGT ACTGGGCGGC AACGCCCTGG TTGGCGAACG GGTCTGGCAG
CGTAATTTGC GACTGCGCAT CCATATTGGC CCCCTGCGTC ACGAGCGCTA CCTGGCCTTC
CTGCCTAATG GCGAGCTGGC TGCCGCCCTC AAGAAAATCC TTACGCTGGC GACGGGCGGC
CAGTTCGAAT ACGAAATCTG CCCGATCCTG CGCGCTGCCG ATGTGCGCCC GGCCGGCCTG
GGCGCTGCGA ACGGCTGCCG CCTGGGTTAC GACAGCTTCA TGCTGACTAG TCCGGAAACA
AACGACCGCA GCGATACCCG CTATCTCACC AATTTCATTC ACTAA
 
Protein sequence
MRTSQRRLDP GLVDSTLEAP ERYEFFQLVR LYESVFRKTA RTAGGDVVNE RIRFRNSLRL 
GFAPSQVDAM APSYRIDEEG LATADLERVE ITPSFMGMLG VNGTLPIHYT EQVINQARFK
RDDSGRAFLD LFTNRSVGHF YRAWKKYKLP IQYETDRQNR FLPIILALSG LGFDALRQRM
NEGPGAIDDE SIAFFAGLLR QRPVSAETLQ RVISGYFRES VEVEQFVGHW YAIPAEQRST
LGGHNVVLGG NALVGERVWQ RNLRLRIHIG PLRHERYLAF LPNGELAAAL KKILTLATGG
QFEYEICPIL RAADVRPAGL GAANGCRLGY DSFMLTSPET NDRSDTRYLT NFIH