Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_2172 |
Symbol | |
ID | 3569814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 2345929 |
End bp | 2346993 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637680641 |
Product | hypothetical protein |
Protein accession | YP_285381 |
Protein GI | 71907794 |
COG category | [S] Function unknown |
COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 0.17033 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCACCT CGCAACGGCG ACTCGATCCT GGCCTAGTCG ATAGCACCCT TGAGGCGCCG GAACGCTACG AGTTTTTCCA GCTCGTGCGT CTGTATGAAA GCGTCTTCCG GAAAACGGCC CGGACAGCCG GTGGCGATGT CGTCAACGAG CGGATTCGCT TCCGTAATTC GTTGCGTCTC GGCTTTGCAC CCAGCCAGGT CGACGCCATG GCACCGAGTT ACCGGATCGA TGAAGAAGGG CTGGCTACCG CCGATCTGGA GCGGGTCGAG ATCACGCCAA GTTTCATGGG TATGCTGGGC GTCAATGGCA CGCTGCCGAT TCATTACACC GAGCAGGTCA TCAACCAGGC GCGCTTCAAG CGTGATGACT CCGGGCGGGC ATTCCTCGAT CTGTTCACCA ATCGCTCGGT TGGTCATTTC TACCGCGCCT GGAAGAAATA CAAGCTGCCG ATCCAGTATG AAACGGATCG GCAGAACCGT TTTCTCCCGA TTATTCTGGC GCTGAGCGGA CTGGGCTTTG ATGCCTTGCG TCAACGCATG AATGAAGGAC CAGGCGCCAT CGACGATGAG TCGATTGCCT TCTTTGCCGG CCTTTTGCGG CAGCGGCCGG TCTCGGCCGA AACCCTGCAG CGCGTGATCA GCGGCTATTT TCGCGAAAGC GTCGAAGTTG AACAGTTCGT CGGGCATTGG TATGCCATTC CTGCTGAGCA GCGCTCGACG CTGGGTGGCC ACAACGTCGT ACTGGGCGGC AACGCCCTGG TTGGCGAACG GGTCTGGCAG CGTAATTTGC GACTGCGCAT CCATATTGGC CCCCTGCGTC ACGAGCGCTA CCTGGCCTTC CTGCCTAATG GCGAGCTGGC TGCCGCCCTC AAGAAAATCC TTACGCTGGC GACGGGCGGC CAGTTCGAAT ACGAAATCTG CCCGATCCTG CGCGCTGCCG ATGTGCGCCC GGCCGGCCTG GGCGCTGCGA ACGGCTGCCG CCTGGGTTAC GACAGCTTCA TGCTGACTAG TCCGGAAACA AACGACCGCA GCGATACCCG CTATCTCACC AATTTCATTC ACTAA
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Protein sequence | MRTSQRRLDP GLVDSTLEAP ERYEFFQLVR LYESVFRKTA RTAGGDVVNE RIRFRNSLRL GFAPSQVDAM APSYRIDEEG LATADLERVE ITPSFMGMLG VNGTLPIHYT EQVINQARFK RDDSGRAFLD LFTNRSVGHF YRAWKKYKLP IQYETDRQNR FLPIILALSG LGFDALRQRM NEGPGAIDDE SIAFFAGLLR QRPVSAETLQ RVISGYFRES VEVEQFVGHW YAIPAEQRST LGGHNVVLGG NALVGERVWQ RNLRLRIHIG PLRHERYLAF LPNGELAAAL KKILTLATGG QFEYEICPIL RAADVRPAGL GAANGCRLGY DSFMLTSPET NDRSDTRYLT NFIH
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