| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2118 |
|---|
| Symbol | |
|---|
| ID | 3567534 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 2288484 |
|---|
| End bp | 2289764 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637680591 |
|---|
| Product | glycerate 2-kinase |
|---|
| Protein accession | YP_285331 |
|---|
| Protein GI | 71907744 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2379] Putative glycerate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 60 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.143234 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACTC CCATCCAGCC GCGCCATTTG CTGCAGCAGA TGTTCCACGC CGCCATCGAG
GCCGCCCAGT CGACACATTG CATTCCGCCA TACCTTCCAG AAGTACCTAA CGGCCGCCTG
ATTGTCATCG GTGCCGGCAA GGCTTCGGCG GCGATGGCCC AGGCCGTCGA GGACAACTGG
CCCGGCGAAC TTTCCGGCCT GGTCGTCACC CGCTACGGCT ATGGCGTTCC CTGCAAGCGC
ATCGAAATCG TCGAAGCCGC CCATCCGGTG CCCGATGCCG CCGGGCTCGC CGCCGCCGGT
CGCATTCGCG ATCTGGTCAG CGACCTTACC GCCGACGACA CGGTGCTCTG CCTGATCTCA
GGCGGAGGTT CGGCGCTGCT TGCCTTGCCG CTCGCCGGCA TCACGCTTGA AGACAAGCAG
GCAGTCAGTC GCGCCCTGCT CAAGTCGGGG GCCAGCATCA GCGAAATGAA TTGCGTGCGC
CGTCATCTGT CGGCGATCAA GGGCGGTCGC CTGGCTGCTG CCTGCCATCC TGCCCGAGTG
GTCACGCTGC TGATTTCCGA CGTACCCGGC GACAATCCCT GCGACATCGC CTCCGGTCCC
ACCGTCGCCG ACGCAACCAC CTGCGCTGAT GCGTTAGCCA TCGTCCGCCG CTATGGCATC
GACCTGCCGC CGCATGTCCG GGAAATTCTC GAAAGCGGCG AGGGCGAATC CATCAAGCCG
GACGATCCCG TGCTGAGCAG GATCGAAACT CACATGATTG CCACACCCCA GATGGCGCTC
GAAGCTGCCG CCAAAGTCGC TGCTGCTCAT GGCTACCCAG CTCACATTCT GGGAGACAGC
ATCGAAGGCG AAGCTGCCGA TGTTGGCAAG GTCATGGCCG GCATGGCTTT GCAGGTTTCC
CGTCATGGCC AACCGTTCAA AGCCCCCTGC ATCCTGCTCT CCGGTGGAGA AACCACAGTT
ACCGTCAGCG GCAGTGGGCG GGGCGGGCGC AATGTCGAGT TTCTTTTGTC ACTCGGCGTG
GCTCTCGAAG GCCGGGCCGG CATCCATGCC CTGGCCGGTG ATACCGATGG TGTCGATGGA
CAGGAGGAGA TTGCCGGCGC CTATCTCGCG CCCCACTCGC TACAACGCGC CTGGGGCTTG
GGCATCCGTC CCAAGGATAG CCTCGACAAC AACGATGGGC ATTCCTTCTT CAGTGCCTTG
GGCGACTCGA TCATTACTGG CCCGACGCTG ACCAACCTCA ATGACTTTCG CGCCATTTTC
ATTACCGGCG AGACGGCTTG A
|
|---|
| Protein sequence | MTTPIQPRHL LQQMFHAAIE AAQSTHCIPP YLPEVPNGRL IVIGAGKASA AMAQAVEDNW
PGELSGLVVT RYGYGVPCKR IEIVEAAHPV PDAAGLAAAG RIRDLVSDLT ADDTVLCLIS
GGGSALLALP LAGITLEDKQ AVSRALLKSG ASISEMNCVR RHLSAIKGGR LAAACHPARV
VTLLISDVPG DNPCDIASGP TVADATTCAD ALAIVRRYGI DLPPHVREIL ESGEGESIKP
DDPVLSRIET HMIATPQMAL EAAAKVAAAH GYPAHILGDS IEGEAADVGK VMAGMALQVS
RHGQPFKAPC ILLSGGETTV TVSGSGRGGR NVEFLLSLGV ALEGRAGIHA LAGDTDGVDG
QEEIAGAYLA PHSLQRAWGL GIRPKDSLDN NDGHSFFSAL GDSIITGPTL TNLNDFRAIF
ITGETA
|
|---|
| |