| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2107 |
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| Symbol | |
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| ID | 3567003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 2274859 |
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| End bp | 2276505 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637680580 |
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| Product | activation/secretion signal peptide protein |
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| Protein accession | YP_285320 |
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| Protein GI | 71907733 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 0.385271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGA ACAAATTCAG CACGTGCTTG GCCATGGCAC TCATGGCCTA CGTGGCGCAA
GCCGCTGCGC AGGCAGGCTC GTCCCTGCAG GGGCCGGTAC CGCCCCAGCC CTTGCCCTCT
GACGCCGGGG CTGTGCCAGC GCTTCCCGCG ATCAAGGCGA AGGCGTCCGA GGCCGGCGGG
GTAAGCGTGC TTCTCAAGTC CGTCGAAATT ACCGGCAACA AGACCCTGGA TAGCGCCACG
CTGCTTTCCG GTCTTGGCCA AGTGTCGGGC AAGTCTTTCG ACATGGCTGG CCTGAATGCC
CTGACTGCAA ATATTGAAAC GCAGTATCGC GCTGCCGGCT ATCCATTCAC CCAGGTGATC
CTTCCGCCGC AGGACCTGAA GGACGGTGTC CTCAGAATCA ATGTCATCGA GGGGCGGTAT
GGCCTCATTC GCGCTACCGG AAAAGGTACG CTGCCGGCGG GCGCCCAGCC TTTCCTCGAC
TTTGGCTTGA ACGGCGGTGA TCCAATCGAG AACAAGGTGC TTGAACGTAG ACTGCTGATA
CTTGACGATC AGCCGGGCAT GAAAATTCGC CCGGTCATTC GGCCCGGCGA CAACTTCGGC
GAGGCTGATC TGGAGGTGAA CGTCGAGCGT GCCTCGTATA TCAGCGGCGA GGCCGGTGTG
GACAACACCG GCGCACGCTC CACCGGCGAA TATCGAGCCC GAGCCGCGTT GTATGCCAAC
AGCCCGTTCA TGTACGGCGA CAAGCTTTCG CTGAATGGCT TGTACACCGA CAAGGATATG
TGGCTCGGTT CGCTGGATTA CGAATTGCCG CTGGGCGCTT CCGGCTTGCG CGGTCAGGTC
GGTTTTGCAC ATACCAGTTA TCAGTTGGGC GCGCAGTTTG CAGCGCTGAA TGCCAAAGGT
TATGCGGACG TAGCGACGGC CAGATTGAGC TATCCACTGA TTCGCTCGCA AGCCACGAAT
GTGCTGCTGA CACTGGGTTA CCAGCACAAG GACCTTGAAG ATCGTTACGA CAGCACACAT
ACCATTCGCA ACAAGAGCAG CGATGGCATT CCGGTCGGGC TACAGTTCGA CAAGCGCGAT
ACGCTGTGGG GCGGAGGTGT GACCTACGGT TCGCTCGGCT GGCTTCCCGG AAATCTCAAA
CTCGATGCCA ACATGACGGC CACGGATAGC GAAACGGCAA AGACCAAAGG CAGCTTCAAC
AAGGTAAATC TGGACATTGC CCGCATCCAG CAAGTGTTCG GCACAGTGAC CGCCTACGCG
CGCTATTCCG GGCAATGGGC GGACAAGAAT CTGGATTCCT CCGAGAAATT CAACCTCGGT
GGTTTCTATG GTGTGCGCGC TTATCCGCTG GGAGAAGGCG TTGGCGACAA GGGATGGTTC
ACCCAGCTGG AACTGCGCTA CGCGATTGGC CAGGTAACGC CTTTCGTTTT CCACGATATG
GGCGAAACGG ACACGAATGC GAAGCCTTGG GATGCAAATT CAGCAGCCAA GCGCAAGTTG
GCCGGCTCCG GTGTCGGTAT CCGTGCCATG CTTGACGGCT GGAGTCTTGA CGCCACCGTC
GCTTGGCGCA CGCAAGGCGG CCCCTCAACC TCGGAAAACG TCGATCGCAA CCCACGTATT
TTTTTCATGC TGGGGCGCCG GTTTTAA
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| Protein sequence | MKKNKFSTCL AMALMAYVAQ AAAQAGSSLQ GPVPPQPLPS DAGAVPALPA IKAKASEAGG
VSVLLKSVEI TGNKTLDSAT LLSGLGQVSG KSFDMAGLNA LTANIETQYR AAGYPFTQVI
LPPQDLKDGV LRINVIEGRY GLIRATGKGT LPAGAQPFLD FGLNGGDPIE NKVLERRLLI
LDDQPGMKIR PVIRPGDNFG EADLEVNVER ASYISGEAGV DNTGARSTGE YRARAALYAN
SPFMYGDKLS LNGLYTDKDM WLGSLDYELP LGASGLRGQV GFAHTSYQLG AQFAALNAKG
YADVATARLS YPLIRSQATN VLLTLGYQHK DLEDRYDSTH TIRNKSSDGI PVGLQFDKRD
TLWGGGVTYG SLGWLPGNLK LDANMTATDS ETAKTKGSFN KVNLDIARIQ QVFGTVTAYA
RYSGQWADKN LDSSEKFNLG GFYGVRAYPL GEGVGDKGWF TQLELRYAIG QVTPFVFHDM
GETDTNAKPW DANSAAKRKL AGSGVGIRAM LDGWSLDATV AWRTQGGPST SENVDRNPRI
FFMLGRRF
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