| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2022 |
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| Symbol | |
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| ID | 3566969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 2175660 |
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| End bp | 2176259 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637680493 |
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| Product | RNA polymerase sigma factor RpoE |
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| Protein accession | YP_285237 |
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| Protein GI | 71907650 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02939] RNA polymerase sigma factor RpoE |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 0.000162889 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTGAGC GCGAAATCGA TCAGGTGCTG GTCGAACGGG CGCAAGGCGG AGATCAGCGC
GCCTTCGACC AGTTGGTGAG CAAATACCAG CGTAAGCTGG GGCGTTTGCT GTCGCGTTTC
ATCCGTGATG CGGCGGAAGT CGAGGATGTG TCGCAGGAGG CTTTCATTAA GGCTTATCGG
GCCTTGCCTT CCTTCCGTGG CGAGAGTGCC TTTTACACTT GGTTGTATCG CATTGGCATC
AATACTGCGA AGAACTATCT GGTGTCGCAG GGGCGAAGGG CGCCGACTAG CACTGAGTTC
GACTCAGAGG AGGCTGAAAC TTTCGAAGAA GCCAGCCAGT TACGGGATAT CAATACTCCA
GAAAGCCTTC TTCTGTCCAA GCAGATTGGT GAAACAGTGA ATGCAGCAAT GGATTCCTTG
CCGGAGGAAC TCCGTACAGC AATCGTACTA CGCGAACTGG AGGGGTTGTC CTATGAGGAA
ATCGCCGGAA TTATGAATTG TCCGATAGGA ACTGTCCGGT CACGTATTTT TCGTGCCAGA
GAGGCTGTAG CTGCAAAGTT ACGCCCGTTA CTTGATACGT CACCTGACAA GCGTTGGTAA
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| Protein sequence | MSEREIDQVL VERAQGGDQR AFDQLVSKYQ RKLGRLLSRF IRDAAEVEDV SQEAFIKAYR
ALPSFRGESA FYTWLYRIGI NTAKNYLVSQ GRRAPTSTEF DSEEAETFEE ASQLRDINTP
ESLLLSKQIG ETVNAAMDSL PEELRTAIVL RELEGLSYEE IAGIMNCPIG TVRSRIFRAR
EAVAAKLRPL LDTSPDKRW
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