Gene Daro_2016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2016 
Symbol 
ID3566963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2170181 
End bp2171107 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content58% 
IMG OID637680487 
Product[Acyl-carrier-protein] S-malonyltransferase 
Protein accessionYP_285231 
Protein GI71907644 
COG category[I] Lipid transport and metabolism 
COG ID[COG0331] (acyl-carrier-protein) S-malonyltransferase 
TIGRFAM ID[TIGR00128] malonyl CoA-acyl carrier protein transacylase 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value0.775341 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTTG CATTCGTATT TCCCGGTCAA GGCTCACAGA GCGTTGGCAT GATGTCAGCT 
TACGGCGATG CGCCCGTGGT TCGCGCCACT TTTGATGAGG CCTCAGCGGC GCTGGGCGAT
GATCTTTGGT CCATGGTCGC CAATGGCCCG GCTGAATTGC TGACCCAAAC GGTTAACACG
CAGCCTGTTA TGCTGACCGC AGGTATTGCA GTTTGGCGCC TGTGGCAAGA GAAGGGCGGC
AGGAAGCCGG CGGTCGTTGC CGGCCACAGC CTGGGTGAAT ACTCCGCGCT CGTCGCGGCC
GGGGTGATCG ACCTGAAGGA TGCGGTGCCG CTGGTTCGCC TGCGTGCTGC AGCCATGCAG
GAGGCTGTTC CGGTAGGGAC TGGTGCCATG GCCGCGGTAC TTGGATTGGA TAATGCTGGG
ATTGCTGCTG CCTGTGCAGA GGCAGCGCAA GGCGAAGTAG TCGAGCCAGT TAATTTCAAT
GCCAATGGTC AGACCGTTAT TGCCGGTCAC AAAGCAGCTG TCGAGCGCGC CATGGAGGCG
TGCAAAGCCC GTGGTGCCAA GATGGCCAAG GCATTGCCCG TCTCAGCTCC CTTTCATTCA
TCTCTGATTC GCCCGGCTGC TGACAAACTT GCTGCCCGCT TGGCTGAGTT GTCTCTGAAT
GCTCCATTAA TTCCGGTGAT CAATAACGTC GATGTTTCAA TCGAAAATGA TCCCGGTCGC
ATCAAGGATG CCTTGGTGCG TCAGGCCTAC AATCCTGTAC GCTGGGTCGA GACTATTCAG
GTCATGGCTT CGCTGGGCGT CTCTACTGTT GCTGAATGCG GCCCCGGCAA GGTGCTGGCT
GGTTTGACCA AGCGATGTGC CGATGGTGTC GTCGGTGTCG CGCTGGCTGA TGCGGCGTCC
ATTGAAGCAA ATCTGGGTCT GGAATGA
 
Protein sequence
MSFAFVFPGQ GSQSVGMMSA YGDAPVVRAT FDEASAALGD DLWSMVANGP AELLTQTVNT 
QPVMLTAGIA VWRLWQEKGG RKPAVVAGHS LGEYSALVAA GVIDLKDAVP LVRLRAAAMQ
EAVPVGTGAM AAVLGLDNAG IAAACAEAAQ GEVVEPVNFN ANGQTVIAGH KAAVERAMEA
CKARGAKMAK ALPVSAPFHS SLIRPAADKL AARLAELSLN APLIPVINNV DVSIENDPGR
IKDALVRQAY NPVRWVETIQ VMASLGVSTV AECGPGKVLA GLTKRCADGV VGVALADAAS
IEANLGLE