Gene Daro_2015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2015 
Symbol 
ID3566962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2169205 
End bp2170164 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content56% 
IMG OID637680486 
Product3-oxoacyl-(acyl carrier protein) synthase III 
Protein accessionYP_285230 
Protein GI71907643 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones63 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGCAC GCCTGAGTGG CACCGGCAGT TATCTGCCGG GTAATCCTGT CAGCAACAGC 
GATCTAGCTG CGCGCGGTAT CGATACCAGC GACGAGTGGA TCGTCACTCG TACCGGCATT
CGCAGTCGCT ATCTCGCTCC ACCGGGTACT ACTTCGAGCG AACTTGGCTT GATCGCCGCG
CAAAAAGCGC TGGAAATGGC CGGCGTGGCA GGCGCCGACC TTGATCTGAT CATCGTTGCT
ACCTCGACTC CCGATTTCAT CTTTCCGAGC ACTGCCTGCC TAATCCAAGG AAAACTTGGC
AACAAGGGGG CTGCAGCCTT TGATGTTCAG GCAGTCTGCG CCGGTTTTAC CTACGCTCTG
GGTATTGCCG AAAAATTCAT TTGCTCCGGC AGCCACAAGA AAGCCTTGGT TATTGGTGCC
GAGGTGTTTT CGCGCATCCT TGACTGGAAC GATAGGGGGA CCTGCGTCCT GTTTGGCGAT
GGCGCCGGGG CTGTGGTTCT TGAGGCCGCT GATAAACCAG GCATTCTGGC TACGGCCATG
CATGCCGACG GTAGCCAGAG CGGTATCCTG AATGTGCCGG GGCAAATTTG CGGCGGTCAG
GTGACTGGTG ACCCTTTCCT GCGCATGGAC GGCCAGGCAG TCTTCAAATT TGCTGTGCGC
GTGCTGGCCG ATATAGCCGA GAAAGTCTGT CAAGCCGCCG ATATTCAAAC CAGTGATGTT
GATTGGTTGA TTCCTCATCA GGCAAATATT CGAATTATCG AAGCTACCGG CAAGAAGCTG
GGGGTCGATC GCGATAAGGT GATCGTTACT GTTGACCGCC ATGGCAACAC TTCCGCCGCT
TCTGTACCGC TGGCGCTAGA TGAAGCGGTG CGCGACGGGC GTATCCAGCG AGGCCAGAAG
GTACTTCTTG AAGGCGTTGG TGGCGGCTTT ACTTGGGGCG CAGCCCTGCT TGAATTCTGA
 
Protein sequence
MYARLSGTGS YLPGNPVSNS DLAARGIDTS DEWIVTRTGI RSRYLAPPGT TSSELGLIAA 
QKALEMAGVA GADLDLIIVA TSTPDFIFPS TACLIQGKLG NKGAAAFDVQ AVCAGFTYAL
GIAEKFICSG SHKKALVIGA EVFSRILDWN DRGTCVLFGD GAGAVVLEAA DKPGILATAM
HADGSQSGIL NVPGQICGGQ VTGDPFLRMD GQAVFKFAVR VLADIAEKVC QAADIQTSDV
DWLIPHQANI RIIEATGKKL GVDRDKVIVT VDRHGNTSAA SVPLALDEAV RDGRIQRGQK
VLLEGVGGGF TWGAALLEF