| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2012 |
|---|
| Symbol | |
|---|
| ID | 3566959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 2167365 |
|---|
| End bp | 2167928 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637680483 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_285227 |
|---|
| Protein GI | 71907640 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1399] Predicted metal-binding, possibly nucleic acid-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 79 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAGCAGA ACTTTGTTTT GACTTGGAAA GCCAAAAATA ATATCATTCA AGGTTTAAGT
CGCAACAGCT CAAGATTGAA AAGAATTTCG GACGCTTTCG CATTTGCCAG AGATGGTCGT
GTTCTCAAGG GAACGCTACC TGTCTCGGGT TTTGAACGCC TGCATGATCT GCTGACTGAG
ATCACGGGTG AGGTGGCTTA CCACCTTCAG GGGTTCAAGG GCGAAAGAGG GGAGTTCATG
CTGCGCCTGG AAGTCACGGG GACACTCCCT TTGGCCTGTC AGCGCTGCCT GAGTGCCGTA
TTTTTCGATC TTGATGTCGA TAGCCTGCTG GAGCTTGTTC CGGAGGGCGC CGAGTTATCG
CAAGATGAAC TGGAAGACGA CACCCGAGAT TTTCTGCCGT TGGCGAGTGA ACTGGATGTG
GCTGAGTTTG TTGAGGATGA GATCCTCCTG ACTCTACCAG TGGCGCCGCG GCACGAAGAA
TGTGGCTTGC CTGGTGCGGC AGATGCCGGT GATCGGATTA ATCCGTTTGC TGCGCTGTCC
GGGCTTAAAG GCAAGCCGAA CTGA
|
|---|
| Protein sequence | MKQNFVLTWK AKNNIIQGLS RNSSRLKRIS DAFAFARDGR VLKGTLPVSG FERLHDLLTE
ITGEVAYHLQ GFKGERGEFM LRLEVTGTLP LACQRCLSAV FFDLDVDSLL ELVPEGAELS
QDELEDDTRD FLPLASELDV AEFVEDEILL TLPVAPRHEE CGLPGAADAG DRINPFAALS
GLKGKPN
|
|---|
| |