| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2006 |
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| Symbol | |
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| ID | 3567722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 2163093 |
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| End bp | 2164097 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637680478 |
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| Product | ribosomal large subunit pseudouridine synthase C |
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| Protein accession | YP_285222 |
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| Protein GI | 71907635 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 77 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGGTG CAGGTAACAA TTCAGTGACC CATGTCGAGG TCGGCGAAGA GGAGTTGGGG
CAACGCCTCG ACAACTTTCT GATCAGGCGC TGCAAGGGGG TTCCAAAGAG TCACATCTAC
CGGATTTTGC GTAGCGGAGA AGTCCGCGTG AACAGCAAGC GGGTTGATGC AACCTATCGG
CTTTGTGTTG GCGACAACAT CCGCATCCCG CCGATACGCA TTGCAGAACG ACCCCAGAAC
GAAGTCGATG AAGCCGCCAA GGAACGGGTT GATCTGCCGA TCATCTACGA AGACGAGGCT
ATGCTGATCA TCGACAAGCC CGAAGGTATT GCAGTGCACG GTGGTAGCGG GGTCAGCTTC
GGGGTAATTG AAGCGTTGCG CCGACAGCGT CCGCAAGCCA AGTTTCTCGA ACTGGCCCAT
CGCCTTGACC GCGAAACCTC CGGCGTTCTT CTCGTTGGTA AGAAGCGCCT GGCACTTACC
GCATTGCACG ACATGTTTCG CGAGCACGGT GCTGGTGCCG ACAAGCGCTA TCTGGTGCTG
GTCAAAGGAC GCTGGATGAA CAATACTCAG CACGTCAAAT TGCCCTTGCA CAAGTATCTG
ACTGAAGGCG GTGAGCGACG TGTTTCAGTC GACGCCCAGG GTAAGGCTTC GCATACGGTA
TTTCGCCTGC TGGCTCGCTG GCCCGAGGCA AGTCTACTGG AAGCGCAATT GAAGACTGGG
CGCACCCACC AGATTCGTGT TCATTTGGCG CACCTCGGTT TTCCGATTCT CGGTGATGAG
AAATATGGTG ATTTTGCGCT AAACAAGGCG CTCAAGCGCG ATGGCCTGAA GCGAATGGCG
CTGCATGCCT GGCGCATGGT TTTTCAACAT CCTCTGACGG CTGTGCCGCT CGAATGCATT
GCTCCCTTGC CTGAGGGGGT TGGAAACTAC ATTGCTGCTC TCGACGGGCA AAGCCCTCGG
GAGTTTTCTG CTGAAAACCT TGAATCGATC CTTGCTGCCC GATGA
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| Protein sequence | MNGAGNNSVT HVEVGEEELG QRLDNFLIRR CKGVPKSHIY RILRSGEVRV NSKRVDATYR
LCVGDNIRIP PIRIAERPQN EVDEAAKERV DLPIIYEDEA MLIIDKPEGI AVHGGSGVSF
GVIEALRRQR PQAKFLELAH RLDRETSGVL LVGKKRLALT ALHDMFREHG AGADKRYLVL
VKGRWMNNTQ HVKLPLHKYL TEGGERRVSV DAQGKASHTV FRLLARWPEA SLLEAQLKTG
RTHQIRVHLA HLGFPILGDE KYGDFALNKA LKRDGLKRMA LHAWRMVFQH PLTAVPLECI
APLPEGVGNY IAALDGQSPR EFSAENLESI LAAR
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